RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SPDYE6P0CI01 402 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 PDGFRAP16234 1089 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 GRIA1P42261 906 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 BMT2Q1RMZ1 405 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 RABGAP1LQ5R372 815 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 RINLQ6ZS11 566 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 TRABD2AQ86V40 505 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 MCF2L2Q86YR7 1114 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 MCUQ8NE86 351 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 MAIP1Q8WWC4 291 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 PRPF31Q8WWY3 499 aaKnown RBP8.71□□□□□ -1.02
SNX13-201ENST00000409076 TFAP2BQ92481 460 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 IWS1Q96ST2 819 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 PTPRHQ9HD43 1115 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 ZFATQ9P243 1243 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 IRS2Q9Y4H2 1338 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 LAMA3Q16787 3333 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 PLCH1Q4KWH8 1693 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 FCHO1O14526 889 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 DNALI1O14645 258 aaPredicted RBP8.71□□□□□ -1.02
SNX13-201ENST00000409076 MAP3K7O43318 606 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 ITGB3P05106 788 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 CYP1A2P05177 515 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 RPL22P35268 128 aaKnown RBP8.71□□□□□ -1.02
SNX13-201ENST00000409076 AVPR1AP37288 418 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 RANBP1P43487 201 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 NEK3P51956 506 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 CUL3Q13618 768 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 CRY2Q49AN0 593 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 IZUMO2Q6UXV1 221 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 DENND5BQ6ZUT9 1274 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 IGDCC3Q8IVU1 814 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 SPATA6LQ8N4H0 392 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 PNPLA1Q8N8W4 532 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 UTP4Q969X6 686 aaKnown RBP8.71□□□□□ -1.02
SNX13-201ENST00000409076 EMID1Q96A84 441 aaPredicted RBP8.71□□□□□ -1.02
SNX13-201ENST00000409076 SCYL1Q96KG9 808 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 MOV10L1Q9BXT6 1211 aaKnown RBP8.71□□□□□ -1.02
SNX13-201ENST00000409076 ZC3H7BQ9UGR2 993 aaKnown RBP8.71□□□□□ -1.02
SNX13-201ENST00000409076 FEM1BQ9UK73 627 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 ADAMTS7Q9UKP4 1686 aa8.71□□□□□ -1.02
SNX13-201ENST00000409076 BTNL10A8MVZ5 291 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 E9PBE3 544 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 LIASO43766 372 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 KIF1CO43896 1103 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 KLHL41O60662 606 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 TMEM63AO94886 807 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 NPTXRO95502 500 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 GHRP10912 638 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 GZMAP12544 262 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 CCND2P30279 289 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 ABL2P42684 1182 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 GEMIN4P57678 1058 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 NME3Q13232 169 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PTK6Q13882 451 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 ZRSR2Q15696 482 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 FAM219BQ5XKK7 198 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 LPCAT4Q643R3 524 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 LAYNQ6UX15 382 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PCGF5Q86SE9 256 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 ATP11CQ8NB49 1132 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 SMC1BQ8NDV3 1235 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.7□□□□□ -1.02
SNX13-201ENST00000409076 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 NMD3Q96D46 503 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 SLITRK1Q96PX8 696 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 B3GNT5Q9BYG0 378 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 ROPN1BQ9BZX4 212 aaPredicted RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 ROPN1Q9HAT0 212 aaPredicted RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 IP6K2Q9UHH9 426 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PLA2G4CQ9UP65 541 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 HES2Q9Y543 173 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 DDX60Q8IY21 1712 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 UBR2Q8IWV8 1755 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 CES2O00748 559 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 AIM2O14862 343 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PRPSAP2O60256 369 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PGM3O95394 542 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 TNNC2P02585 160 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 NOMO3P69849 1222 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 RASA2Q15283 850 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 LACTB2Q53H82 288 aaPredicted RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 CROCCP2Q86T23 111 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 ABRAQ8N0Z2 381 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 RBM41Q96IZ5 413 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 SERAC1Q96JX3 654 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 LRRC19Q9H756 370 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PXMP2Q9NR77 195 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 NMRK1Q9NWW6 199 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 KLK14Q9P0G3 267 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 SCOCQ9UIL1 159 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 A0A1B0GVG6 124 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 GGPS1O95749 300 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 IL1R2P27930 398 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 ROR1Q01973 937 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 KLC1Q07866 573 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 AP1B1Q10567 949 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 GRM1Q13255 1194 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PLEKHG4Q58EX7 1191 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms