RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 RGS7P49802 495 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 RAB27AP51159 221 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 PPP1R7Q15435 360 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 PMF1Q6P1K2 205 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 FAM183BPQ6ZVS7 135 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 MRPL10Q7Z7H8 261 aaKnown RBP19.96■□□□□ 0.79
USP39-202ENST00000409025 STK32AQ8WU08 396 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 SLC35F5Q8WV83 523 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 SLC4A5Q9BY07 1137 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 TSPYL2Q9H2G4 693 aaPredicted RBP19.96■□□□□ 0.79
USP39-202ENST00000409025 ASNSD1Q9NWL6 643 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 PIK3R2O00459 728 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 LRCH4O75427 683 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 RNF8O76064 485 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 FAM163BP0C2L3 166 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 GHRP10912 638 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 WARSP23381 471 aaKnown RBP19.95■□□□□ 0.78
USP39-202ENST00000409025 LMO2P25791 158 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 PTPN7P35236 360 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 CCNG2Q16589 344 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 ZNF618Q5T7W0 954 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 MFSD7Q6UXD7 560 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 SPOCD1Q6ZMY3 1216 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 ATG4AQ8WYN0 398 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 LPPQ93052 612 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 TNIP3Q96KP6 325 aa19.95■□□□□ 0.78
USP39-202ENST00000409025 TRMT13Q9NUP7 481 aaKnown RBP19.95■□□□□ 0.78
USP39-202ENST00000409025 HCRTO43612 131 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 OPA1O60313 960 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 TJP3O95049 919 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 GPD1P21695 349 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 APLP1P51693 650 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ZNF143P52747 638 aaPredicted RBP19.94■□□□□ 0.78
USP39-202ENST00000409025 SLC25A11Q02978 314 aaKnown RBP19.94■□□□□ 0.78
USP39-202ENST00000409025 PDE4CQ08493 712 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 TXNRD3NBQ6F5E7 133 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 SYDE1Q6ZW31 735 aaPredicted RBP19.94■□□□□ 0.78
USP39-202ENST00000409025 ANKS1BQ7Z6G8 1248 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 TMEM110Q86TL2 294 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ARFGAP1Q8N6T3 406 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ANKRD52Q8NB46 1076 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 GSTCDQ8NEC7 633 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 FMO2Q99518 471 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 LPIN3Q9BQK8 851 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 R3HDM2Q9Y2K5 976 aaKnown RBP19.94■□□□□ 0.78
USP39-202ENST00000409025 LRRD1A4D1F6 860 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ARL5CA6NH57 179 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 MOXD2PA6NHM9 499 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 TULP2O00295 520 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 CYB561D2O14569 222 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 CCDC130P13994 396 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ADORA2BP29275 332 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 MAP2K2P36507 400 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 RPL21P46778 160 aaKnown RBP19.94■□□□□ 0.78
USP39-202ENST00000409025 BCAT1P54687 386 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 BST2Q10589 180 aaKnown RBP19.94■□□□□ 0.78
USP39-202ENST00000409025 LPIN1Q14693 890 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 TFDP3Q5H9I0 405 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 FAM26DQ5JW98 314 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 KAZNQ674X7 775 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 IQCKQ8N0W5 287 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 GOLGA6L1Q8N7Z2 621 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ATL2Q8NHH9 583 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 RAPGEF5Q92565 580 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 GLT1D1Q96MS3 346 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ZIM3Q96PE6 472 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 TRAIPQ9BWF2 469 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ZWILCHQ9H900 591 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ZDHHC18Q9NUE0 388 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 VPS18Q9P253 973 aa19.94■□□□□ 0.78
USP39-202ENST00000409025 ZNF623O75123 536 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 GAS8O95995 478 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 KRT17Q04695 432 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 TRIM71Q2Q1W2 868 aaKnown RBP19.93■□□□□ 0.78
USP39-202ENST00000409025 AGMOQ6ZNB7 445 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 ZDHHC17Q8IUH5 632 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 CNPY3Q9BT09 278 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 OSBPL7Q9BZF2 842 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 GRHL1Q9NZI5 618 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 FAN1Q9Y2M0 1017 aa19.93■□□□□ 0.78
USP39-202ENST00000409025 C2CD4BA6NLJ0 364 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 RNF40O75150 1001 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 KRT10P13645 584 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 FLT3P36888 993 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 PLTPP55058 493 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 SLC6A3Q01959 620 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 MTMR3Q13615 1198 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 DSC3Q14574 896 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 OSTM1Q86WC4 334 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 RXFP2Q8WXD0 754 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 RIN2Q8WYP3 895 aaPredicted RBP19.92■□□□□ 0.78
USP39-202ENST00000409025 ACSF2Q96CM8 615 aaPredicted RBP19.92■□□□□ 0.78
USP39-202ENST00000409025 CCDC114Q96M63 670 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 TSEN34Q9BSV6 310 aaKnown RBP19.92■□□□□ 0.78
USP39-202ENST00000409025 MIOSQ9NXC5 875 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 hCG_1818297A0A087WSY0 165 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 MGEA5O60502 916 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 CAND2O75155 1236 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 PDGFRAP16234 1089 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 YY1P25490 414 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms