RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 FUKQ8N0W3 1084 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 SLC2A14Q8TDB8 520 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 RIN2Q8WYP3 895 aaPredicted RBP23.27■■□□□ 1.32
EPCAM-202ENST00000405271 MYLPFQ96A32 169 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 PCED1BQ96HM7 432 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 KCND1Q9NSA2 647 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.27■■□□□ 1.32
EPCAM-202ENST00000405271 GTF3C4Q9UKN8 822 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 INTUQ9ULD6 942 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 SSX2IPQ9Y2D8 614 aa23.27■■□□□ 1.32
EPCAM-202ENST00000405271 ADORA2BP29275 332 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 SSTR3P32745 418 aaPredicted RBP23.26■■□□□ 1.31
EPCAM-202ENST00000405271 NSFP46459 744 aaKnown RBP23.26■■□□□ 1.31
EPCAM-202ENST00000405271 BST2Q10589 180 aaKnown RBP23.26■■□□□ 1.31
EPCAM-202ENST00000405271 NFE2Q16621 373 aaPredicted RBP23.26■■□□□ 1.31
EPCAM-202ENST00000405271 PKDCCQ504Y2 493 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 FAM35AQ86V20 835 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 VPS52Q8N1B4 723 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 MICALL1Q8N3F8 863 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 ANKRD52Q8NB46 1076 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 NOX5Q96PH1 765 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 TMEM209Q96SK2 561 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 LPIN3Q9BQK8 851 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 B3GNT5Q9BYG0 378 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 ZBP1Q9H171 429 aa23.26■■□□□ 1.31
EPCAM-202ENST00000405271 CREMQ03060 361 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 UBE3AQ05086 875 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 SMARCB1Q12824 385 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 PRSS55Q6UWB4 352 aaPredicted RBP23.25■■□□□ 1.31
EPCAM-202ENST00000405271 TTC30AQ86WT1 665 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 PHF13Q86YI8 300 aaPredicted RBP23.25■■□□□ 1.31
EPCAM-202ENST00000405271 MSANTD4Q8NCY6 345 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 C1orf131Q8NDD1 294 aaKnown RBP23.25■■□□□ 1.31
EPCAM-202ENST00000405271 TRIM11Q96F44 468 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 SMARCD1Q96GM5 515 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 MED10Q9BTT4 135 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 C11orf84Q9BUA3 381 aaPredicted RBP23.25■■□□□ 1.31
EPCAM-202ENST00000405271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.25■■□□□ 1.31
EPCAM-202ENST00000405271 TAS2R14Q9NYV8 317 aa23.25■■□□□ 1.31
EPCAM-202ENST00000405271 TMCO5BA8MYB1 307 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 H2AFZP0C0S5 128 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 CTSAP10619 480 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 GPD2P43304 727 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 SLC8A3P57103 927 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 CCDC142Q17RM4 750 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 SLC8B1Q6J4K2 584 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 ZNF662Q6ZS27 426 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 H2AFVQ71UI9 128 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 FUBP3Q96I24 572 aaKnown RBP eCLIP23.24■■□□□ 1.31
EPCAM-202ENST00000405271 PRDM6Q9NQX0 595 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 MRPL17Q9NRX2 175 aaKnown RBP23.24■■□□□ 1.31
EPCAM-202ENST00000405271 KRT82Q9NSB4 513 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 LMCD1Q9NZU5 365 aa23.24■■□□□ 1.31
EPCAM-202ENST00000405271 H3BNC9 293 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 FAM200BP0CF97 657 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 CPB1P15086 417 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 SLC39A12Q504Y0 691 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 PAQR9Q6ZVX9 377 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 LRRTM3Q86VH5 581 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 SPATA2LQ8IUW3 424 aaPredicted RBP23.23■■□□□ 1.31
EPCAM-202ENST00000405271 CCAR2Q8N163 923 aaKnown RBP23.23■■□□□ 1.31
EPCAM-202ENST00000405271 C2orf15Q8WU43 125 aaKnown RBP23.23■■□□□ 1.31
EPCAM-202ENST00000405271 CPA5Q8WXQ8 436 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 SECISBP2LQ93073 1101 aaKnown RBP23.23■■□□□ 1.31
EPCAM-202ENST00000405271 DUSP16Q9BY84 665 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 TSGA10Q9BZW7 698 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 TMLHEQ9NVH6 421 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 ANKRD62A6NC57 917 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 GOLGA6L9A6NEM1 432 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 PJA2O43164 708 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 FTLP02792 175 aaPredicted RBP23.23■■□□□ 1.31
EPCAM-202ENST00000405271 OR4Q2P0C623 313 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 NPR3P17342 541 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 MSNP26038 577 aaKnown RBP23.23■■□□□ 1.31
EPCAM-202ENST00000405271 GPR17Q13304 367 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 CFAP221Q4G0U5 840 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 MON1BQ7L1V2 547 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 WDTC1Q8N5D0 677 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 UBA3Q8TBC4 463 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 VCPIP1Q96JH7 1222 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 ABCB6Q9NP58 842 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 CYLDQ9NQC7 956 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 CDY1Q9Y6F8 540 aa23.23■■□□□ 1.31
EPCAM-202ENST00000405271 CLDN5O00501 218 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 XPO1O14980 1071 aaKnown RBP23.22■■□□□ 1.31
EPCAM-202ENST00000405271 TMEM253P0C7T8 217 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 MYBL1P10243 752 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 GALCP54803 685 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 C1QBPQ07021 282 aaKnown RBP23.22■■□□□ 1.31
EPCAM-202ENST00000405271 PDE4CQ08493 712 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 PDCLQ13371 301 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 GPM6BQ13491 265 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 IPO4Q8TEX9 1081 aaKnown RBP23.22■■□□□ 1.31
EPCAM-202ENST00000405271 STK32AQ8WU08 396 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 SLC35F5Q8WV83 523 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 CTNNBL1Q8WYA6 563 aaPredicted RBP23.22■■□□□ 1.31
EPCAM-202ENST00000405271 FNIP2Q9P278 1114 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 PCDHB5Q9Y5E4 795 aa23.22■■□□□ 1.31
EPCAM-202ENST00000405271 C2CD2LO14523 706 aa23.21■■□□□ 1.31
EPCAM-202ENST00000405271 CALB1P05937 261 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms