RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 F8VP50 259 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 CACNA2D1P54289 1103 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 SIGLEC14Q08ET2 396 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 ORC1Q13415 861 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 CUL2Q13617 745 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 FAM78AQ5JUQ0 283 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 FAM35AQ86V20 835 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 C12orf29Q8N999 325 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 STKLD1Q8NE28 680 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 ST13P5Q8NFI4 369 aaPredicted RBP20.41■□□□□ 0.86
RTN4-207ENST00000402434 ATXN3LQ9H3M9 355 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 SMOC2Q9H3U7 446 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 UXTQ9UBK9 157 aaPredicted RBP20.41■□□□□ 0.86
RTN4-207ENST00000402434 DUSP12Q9UNI6 340 aa20.41■□□□□ 0.86
RTN4-207ENST00000402434 ATP8B3O60423 1300 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 ECI2O75521 394 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 TRIM21P19474 475 aaKnown RBP20.4■□□□□ 0.86
RTN4-207ENST00000402434 FCARP24071 287 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 ANXA13P27216 316 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 SASS6Q6UVJ0 657 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 DENND5BQ6ZUT9 1274 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 EHBP1Q8NDI1 1231 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 SMARCD2Q92925 531 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 ASIC4Q96FT7 647 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 ZMYM5Q9UJ78 669 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 MAGED2Q9UNF1 606 aaPredicted RBP20.4■□□□□ 0.86
RTN4-207ENST00000402434 GREB1Q4ZG55 1949 aa20.4■□□□□ 0.86
RTN4-207ENST00000402434 SRFP11831 508 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 CCDC130P13994 396 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 TBXAS1P24557 533 aaPredicted RBP20.39■□□□□ 0.85
RTN4-207ENST00000402434 LRMPQ12912 555 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 STXBP5Q5T5C0 1151 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 FAM114A1Q8IWE2 563 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 ZSCAN18Q8TBC5 510 aaPredicted RBP20.39■□□□□ 0.85
RTN4-207ENST00000402434 ENOX1Q8TC92 643 aaKnown RBP20.39■□□□□ 0.85
RTN4-207ENST00000402434 SLC2A14Q8TDB8 520 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 ELSPBP1Q96BH3 223 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 SMARCD1Q96GM5 515 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 NT5C1BQ96P26 610 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 GCNAQ96QF7 691 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 KCNK16Q96T55 309 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 HNRNPABQ99729 332 aaKnown RBP20.39■□□□□ 0.85
RTN4-207ENST00000402434 TTLL2Q9BWV7 592 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 DNAI2Q9GZS0 605 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 SLITRK6Q9H5Y7 841 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 ZFP14Q9HCL3 533 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 CSNK1G1Q9HCP0 422 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 ANO10Q9NW15 660 aa20.39■□□□□ 0.85
RTN4-207ENST00000402434 SOBPA7XYQ1 873 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 NARSO43776 548 aaKnown RBP20.38■□□□□ 0.85
RTN4-207ENST00000402434 WEE1P30291 646 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 RAD23BP54727 409 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 ARHGAP15Q53QZ3 475 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 TMEM31Q5JXX7 168 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 TANGO2Q6ICL3 276 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 CREBRFQ8IUR6 639 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 UBR7Q8N806 425 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 SLC4A11Q8NBS3 891 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 TMEM176AQ96HP8 235 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 KXD1Q9BQD3 176 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 MED10Q9BTT4 135 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 TASP1Q9H6P5 420 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 DMAP1Q9NPF5 467 aaPredicted RBP20.38■□□□□ 0.85
RTN4-207ENST00000402434 FAM49BQ9NUQ9 324 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 DENND4CQ5VZ89 1909 aa20.38■□□□□ 0.85
RTN4-207ENST00000402434 GTPBP10A4D1E9 387 aaKnown RBP20.37■□□□□ 0.85
RTN4-207ENST00000402434 PRR33A8MZF0 331 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 TADA3O75528 432 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 USP46P62068 366 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 YWHAEP62258 255 aaKnown RBP20.37■□□□□ 0.85
RTN4-207ENST00000402434 CYP4F8P98187 520 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 STX1AQ16623 288 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 ZNF394Q53GI3 561 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 GPR158Q5T848 1215 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 BMP8AQ7Z5Y6 402 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 CYFIP2Q96F07 1278 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 SLC46A2Q9BY10 475 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 PLA2G2FQ9BZM2 168 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 SLC2A4RGQ9NR83 387 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 KRT82Q9NSB4 513 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 SAMSN1Q9NSI8 373 aaKnown RBP20.37■□□□□ 0.85
RTN4-207ENST00000402434 EHD2Q9NZN4 543 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 FAM86C2PA6NEL3 165 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 TMEM221A6NGB7 291 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 M0R296 226 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 TNFRSF10BO14763 440 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 AP1G2O75843 785 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 DDX6P26196 483 aaKnown RBP eCLIP20.37■□□□□ 0.853e-51■□□□□ 9.7
RTN4-207ENST00000402434 MTIF2P46199 727 aaKnown RBP20.37■□□□□ 0.85
RTN4-207ENST00000402434 GCNT1Q02742 428 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 ARID3BQ8IVW6 561 aaPredicted RBP20.37■□□□□ 0.85
RTN4-207ENST00000402434 NUP93Q8N1F7 819 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 ZMIZ2Q8NF64 920 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 E2F7Q96AV8 911 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 HEXIM2Q96MH2 286 aaKnown RBP20.37■□□□□ 0.85
RTN4-207ENST00000402434 SMOQ99835 787 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 IL37Q9NZH6 218 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 NFE2L3Q9Y4A8 694 aa20.37■□□□□ 0.85
RTN4-207ENST00000402434 BEST1O76090 585 aa20.36■□□□□ 0.85
RTN4-207ENST00000402434 ACO1P21399 889 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms