RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CELF5Q8N6W0 485 aaKnown RBP16.92■□□□□ 0.3
ATG4B-203ENST00000400772 RIN3Q8TB24 985 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 BPIFB1Q8TDL5 484 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 FAM3CQ92520 227 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 USP13Q92995 863 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-203ENST00000400772 BCO2Q9BYV7 579 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 TMEM30AQ9NV96 361 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 UXTQ9UBK9 157 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-203ENST00000400772 ZMYM5Q9UJ78 669 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 CCL26Q9Y258 94 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 PIAS3Q9Y6X2 628 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 MIA3Q5JRA6 1907 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 OBSL1O75147 1896 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 GOLGA6L4A6NEF3 574 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 SOX9P48436 509 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 USP46P62068 366 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 PPP3CAQ08209 521 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 ADAM9Q13443 819 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 SGSM1Q2NKQ1 1148 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 ARHGAP29Q52LW3 1261 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 ZNF667Q5HYK9 610 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 B3GALNT2Q8NCR0 500 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 MRPS31Q92665 395 aaKnown RBP16.91■□□□□ 0.3
ATG4B-203ENST00000400772 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-203ENST00000400772 C8orf48Q96LL4 319 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 SLC22A12Q96S37 553 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 B3GNT5Q9BYG0 378 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 GTSE1Q9NYZ3 720 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 MRPS17Q9Y2R5 130 aaKnown RBP16.91■□□□□ 0.3
ATG4B-203ENST00000400772 PTPRDP23468 1912 aa16.91■□□□□ 0.3
ATG4B-203ENST00000400772 GREB1Q4ZG55 1949 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 CLDN5O00501 218 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 HLA-DRAP01903 254 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 SP9P0CG40 484 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 TRIM49P0CI25 452 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 TRIM49CP0CI26 452 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 CCNE1P24864 410 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 PSMC2P35998 433 aaKnown RBP16.9■□□□□ 0.3
ATG4B-203ENST00000400772 AVPR1AP37288 418 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 PRCPP42785 496 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 MAGEA9P43362 315 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 RPS9P46781 194 aaKnown RBP16.9■□□□□ 0.3
ATG4B-203ENST00000400772 FAM160A1Q05DH4 1040 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 TNK2Q07912 1038 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 WDR44Q5JSH3 913 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 SPOPLQ6IQ16 392 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 SCARA5Q6ZMJ2 495 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 PAQR9Q6ZVX9 377 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 INTS8Q75QN2 995 aaKnown RBP16.9■□□□□ 0.3
ATG4B-203ENST00000400772 ASCL5Q7RTU5 278 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 FAM186BQ8IYM0 893 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 TTC8Q8TAM2 541 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 CSGALNACT1Q8TDX6 532 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 CCDC34Q96HJ3 373 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 CEP295NLQ96MC4 621 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 CYP2S1Q96SQ9 504 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 TDP1Q9NUW8 608 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 GCNT4Q9P109 453 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 NDRG2Q9UN36 371 aaKnown RBP16.9■□□□□ 0.3
ATG4B-203ENST00000400772 PCDHA5Q9Y5H7 936 aa16.9■□□□□ 0.3
ATG4B-203ENST00000400772 F8VP50 259 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 TRIM66O15016 1216 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 NCAM2O15394 837 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 GFRA3O60609 400 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 ASS1P00966 412 aaKnown RBP16.89■□□□□ 0.29
ATG4B-203ENST00000400772 RPL13P26373 211 aaKnown RBP16.89■□□□□ 0.29
ATG4B-203ENST00000400772 ASPAP45381 313 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 GCLMP48507 274 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 ENPEPQ07075 957 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 ZNF268Q14587 947 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-203ENST00000400772 EDRF1Q3B7T1 1238 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 COBLL1Q53SF7 1204 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 TXNDC11Q6PKC3 985 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 DENND5BQ6ZUT9 1274 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 TAS1R2Q8TE23 839 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 TAF4BQ92750 862 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 EEF2KMTQ96G04 330 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 GSDMAQ96QA5 445 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 FAM83CQ9BQN1 747 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 TTLL2Q9BWV7 592 aa16.89■□□□□ 0.29
ATG4B-203ENST00000400772 C8orf33Q9H7E9 229 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-203ENST00000400772 APOBEC3GQ9HC16 384 aaKnown RBP16.89■□□□□ 0.29
ATG4B-203ENST00000400772 SPATA6Q9NWH7 488 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-203ENST00000400772 C2orf78A6NCI8 922 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 OTOL1A6NHN0 477 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-203ENST00000400772 CHRNB1P11230 501 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 ANXA13P27216 316 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 KPNA1P52294 538 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-203ENST00000400772 PMS1P54277 932 aaKnown RBP16.88■□□□□ 0.29
ATG4B-203ENST00000400772 NOP14P78316 857 aaKnown RBP16.88■□□□□ 0.29
ATG4B-203ENST00000400772 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 ZNF658Q5TYW1 1059 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-203ENST00000400772 ELOVL4Q9GZR5 314 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 LMAN1LQ9HAT1 526 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 TRPC7Q9HCX4 862 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 HPS4Q9NQG7 708 aa16.88■□□□□ 0.29
ATG4B-203ENST00000400772 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■■■ 96.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms