RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 ZNF473Q8WTR7 871 aaKnown RBP16.54■□□□□ 0.24
CDC42-203ENST00000400259 ZMAT2Q96NC0 199 aaKnown RBP16.54■□□□□ 0.24
CDC42-203ENST00000400259 FAM49AQ9H0Q0 323 aaPredicted RBP16.54■□□□□ 0.24
CDC42-203ENST00000400259 PCDH9Q9HC56 1237 aa16.54■□□□□ 0.24
CDC42-203ENST00000400259 SNTG2Q9NY99 539 aa16.54■□□□□ 0.24
CDC42-203ENST00000400259 NINJ2Q9NZG7 142 aa16.54■□□□□ 0.24
CDC42-203ENST00000400259 CNTN3Q9P232 1028 aa16.54■□□□□ 0.24
CDC42-203ENST00000400259 TSPAN16Q9UKR8 245 aa16.54■□□□□ 0.24
CDC42-203ENST00000400259 GMNCA6NCL1 334 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 HAS3O00219 553 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 ACSL3O95573 720 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
CDC42-203ENST00000400259 IFI35P80217 286 aaPredicted RBP16.53■□□□□ 0.24
CDC42-203ENST00000400259 PKDCCQ504Y2 493 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 UHMK1Q8TAS1 419 aaKnown RBP16.53■□□□□ 0.24
CDC42-203ENST00000400259 FAM107BQ9H098 131 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 YY1AP1Q9H869 796 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 ZWILCHQ9H900 591 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 ASNSD1Q9NWL6 643 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 GGA2Q9UJY4 613 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 PCNTO95613 3336 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 E7EVH7 732 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 RNF8O76064 485 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 SETSIPP0DME0 302 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 CYP2C9P11712 490 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 ARSEP51690 589 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 YARSP54577 528 aaKnown RBP16.53■□□□□ 0.24
CDC42-203ENST00000400259 MFSD10Q14728 455 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 FAM102AQ5T9C2 384 aaPredicted RBP16.53■□□□□ 0.24
CDC42-203ENST00000400259 TLK2Q86UE8 772 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 GLIS1Q8NBF1 620 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 BEST2Q8NFU1 509 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 UBA3Q8TBC4 463 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 TSPAN18Q96SJ8 248 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 EIF2AQ9BY44 585 aaKnown RBP16.53■□□□□ 0.24
CDC42-203ENST00000400259 CXCL16Q9H2A7 254 aa16.53■□□□□ 0.24
CDC42-203ENST00000400259 C2CD4BA6NLJ0 364 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 TRUB2O95900 331 aaKnown RBP16.52■□□□□ 0.24
CDC42-203ENST00000400259 ABHD2P08910 425 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 MIPP30301 263 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 TMEM62Q0P6H9 643 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 MORF4L2Q15014 288 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 KYNUQ16719 465 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 CCDC142Q17RM4 750 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 SMTNL2Q2TAL5 461 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 ERMARDQ5T6L9 678 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 OSMRQ99650 979 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 CNPY3Q9BT09 278 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 PPANQ9NQ55 473 aaKnown RBP16.52■□□□□ 0.24
CDC42-203ENST00000400259 CPA4Q9UI42 421 aa16.52■□□□□ 0.24
CDC42-203ENST00000400259 TPX2Q9ULW0 747 aaKnown RBP16.52■□□□□ 0.24
CDC42-203ENST00000400259 SMIM23A6NLE4 172 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 ENDOD1O94919 500 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 GPD1P21695 349 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 SLCO1A2P46721 670 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 PRAMEF19Q5SWL8 479 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 OLFML2BQ68BL8 750 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 TAOK1Q7L7X3 1001 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 UNC93AQ86WB7 457 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 USP6NLQ92738 828 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 XPO6Q96QU8 1125 aaKnown RBP16.52■□□□□ 0.23
CDC42-203ENST00000400259 FLRT1Q9NZU1 646 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 TUBGCP4Q9UGJ1 667 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 USP18Q9UMW8 372 aa16.52■□□□□ 0.23
CDC42-203ENST00000400259 C5orf60A6NFR6 353 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 DPYSL4O14531 572 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 ATP5DP30049 168 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 PSEN2P49810 448 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 CORO7P57737 925 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 LONRF1Q17RB8 773 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 GOLGA7BQ2TAP0 167 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 KCNT1Q5JUK3 1230 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 FAM183BPQ6ZVS7 135 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 ACTL9Q8TC94 416 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 PWWP2AQ96N64 755 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 RBM15Q96T37 977 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDC42-203ENST00000400259 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
CDC42-203ENST00000400259 SLC4A5Q9BY07 1137 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 LGALS13Q9UHV8 139 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 SHOC2Q9UQ13 582 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 GINS2Q9Y248 185 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 Q9Y3F1 56 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 SNX9Q9Y5X1 595 aa16.51■□□□□ 0.23
CDC42-203ENST00000400259 E5RJQ4 531 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 PPEF2O14830 753 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 CST8O60676 142 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 CHN1P15882 459 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 OTUD4Q01804 1114 aaKnown RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 GPS1Q13098 491 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 HIC1Q14526 733 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 RNASEH2BQ5TBB1 312 aaKnown RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 C9orf57Q5W0N0 161 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 TRNP1Q6NT89 227 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 CYP4V2Q6ZWL3 525 aaPredicted RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 ATXN2LQ8WWM7 1075 aaKnown RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 PHACTR1Q9C0D0 580 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 CCDC134Q9H6E4 229 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms