RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 PDE9AO76083 593 aa10.37□□□□□ -0.75
PTPRM-203ENST00000400060 ME2P23368 584 aa10.37□□□□□ -0.75
PTPRM-203ENST00000400060 PTGS2P35354 604 aa10.37□□□□□ -0.75
PTPRM-203ENST00000400060 CCR3P51677 355 aa10.37□□□□□ -0.75
PTPRM-203ENST00000400060 ZNF677Q86XU0 584 aa10.37□□□□□ -0.75
PTPRM-203ENST00000400060 FLT1P17948 1338 aa10.37□□□□□ -0.75
PTPRM-203ENST00000400060 MTSS1O43312 755 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 MFN2O95140 757 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 GUCY1A2P33402 732 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 VCPP55072 806 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 WASHC5Q12768 1159 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 PLS1Q14651 629 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TAF2Q6P1X5 1199 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ASRGL1Q7L266 308 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TDRPQ86YL5 185 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 CAMK1DQ8IU85 385 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 PAFAH2Q99487 392 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 HNRNPABQ99729 332 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 C20orf96Q9NUD7 363 aaPredicted RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ATP6V1HQ9UI12 483 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 JAG2Q9Y219 1238 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TMEM94Q12767 1356 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ANGPT2O15123 496 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 UFL1O94874 794 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 WDR47O94967 919 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 IFNA8P32881 189 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 HALP42357 657 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 MECOMQ03112 1051 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 BROXQ5VW32 411 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 C3orf62Q6ZUJ4 267 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 RAPH1Q70E73 1250 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 PYDC1Q8WXC3 89 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TAMM41Q96BW9 452 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 DUSP9Q99956 384 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 MARCH7Q9H992 704 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 SENP2Q9HC62 589 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ALG13Q9NP73 1137 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 BARHL2Q9NY43 387 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ZNF221Q9UK13 617 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 RABL2BQ9UNT1 228 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 COPG1Q9Y678 874 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 H0YGN5 161 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 FBP2O00757 339 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 SNAP91O60641 907 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ACTR3P61158 418 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 PURAQ00577 322 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 GRM4Q14833 912 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ARHGEF6Q15052 776 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 MOGQ16653 247 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TYSND1Q2T9J0 566 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 OR52E8Q6IFG1 317 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ABRAXAS1Q6UWZ7 409 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TTC39CQ8N584 583 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 FBXL13Q8NEE6 735 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 CNDP1Q96KN2 507 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 PACSIN1Q9BY11 444 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 IGSF9Q9P2J2 1179 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 SCAF8Q9UPN6 1271 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 NFS1Q9Y697 457 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 MYBP10242 640 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 CLK1P49759 484 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 KLRC3Q07444 240 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ARCQ7LC44 396 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 PDSS2Q86YH6 399 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 SLC30A5Q8TAD4 765 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 CGREF1Q99674 301 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TEX13BQ9BXU2 312 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 LRRC19Q9H756 370 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 ARHGEF10LQ9HCE6 1279 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 IARS2Q9NSE4 1012 aaKnown RBP10.36□□□□□ -0.75
PTPRM-203ENST00000400060 TMEM9Q9P0T7 183 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 SUN2Q9UH99 717 aa10.36□□□□□ -0.75
PTPRM-203ENST00000400060 A6NJR5 290 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 MAGEB2O15479 319 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ZBTB11O95625 1053 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 EIF2AK2P19525 551 aaKnown RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ABL2P42684 1182 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 IST1P53990 364 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 SPOPLQ6IQ16 392 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 OTOAQ7RTW8 1153 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ZNF571Q7Z3V5 609 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 TRIM69Q86WT6 500 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 JDP2Q8WYK2 163 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 CEP44Q9C0F1 390 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 PSTPIP2Q9H939 334 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 PIDD1Q9HB75 910 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ARL8BQ9NVJ2 186 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 DDX43Q9NXZ2 648 aaKnown RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 WDR64B1ANS9 1081 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 E9PBE3 544 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 EIF3DO15371 548 aaKnown RBP eCLIP10.35□□□□□ -0.752e-6■■□□□ 12.9
PTPRM-203ENST00000400060 BGNP21810 368 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 BCAMP50895 628 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 SNRPFP62306 86 aaKnown RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 SCRN3Q0VDG4 424 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 TRABD2AQ86V40 505 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms