RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 BTBD3Q9Y2F9 522 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 SAGE2PA6NJ88 616 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 PRODHO43272 600 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 TRIM3O75382 744 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 ALDH1A1P00352 501 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ZCCHC18P0CG32 403 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ZNF12P17014 697 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 AKAP5P24588 427 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ACADVLP49748 655 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 JAK3P52333 1124 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ATP2C1P98194 919 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 SCRN3Q0VDG4 424 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 GAL3ST3Q96A11 431 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 S100A13Q99584 98 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 RRN3Q9NYV6 651 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 VPS9D1Q9Y2B5 631 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 AK5Q9Y6K8 562 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 HIST1H2AGP0C0S8 130 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 NCAM1P13591 858 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 HIST1H2ADP20671 130 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 LRRC8DQ7L1W4 858 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 ZSCAN18Q8TBC5 510 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 VPS33AQ96AX1 596 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 HIST1H2AHQ96KK5 128 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 HIST1H2AJQ99878 128 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 H2AFJQ9BTM1 129 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 SCUBE2Q9NQ36 999 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 DMTF1Q9Y222 760 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 LRRC14BA6NHZ5 514 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 IDH3BO43837 385 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 ARHGDIBP52566 201 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 RAD51Q06609 339 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 TAF13Q15543 124 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 TCHHL1Q5QJ38 904 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 TTC7AQ9ULT0 858 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 IPPQ9Y573 584 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 A0A1W2PRG6 482 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 DYRK3O43781 588 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 AP1G2O75843 785 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 TCN1P20061 433 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 ADD2P35612 726 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 SCNN1DP51172 638 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 GTF2IP78347 998 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 ELF3P78545 371 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 PDIA5Q14554 519 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 ALX1Q15699 326 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 SLC45A4Q5BKX6 768 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 GRAMD1CQ8IYS0 662 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 CEP170P1Q96L14 293 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 FAM49AQ9H0Q0 323 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 ANAPC2Q9UJX6 822 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 TMCC3Q9ULS5 477 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 ATP7BP35670 1465 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 MAP3K19Q56UN5 1328 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 CD109Q6YHK3 1445 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 C15orf38-AP3S2A0A0A6YYH1 394 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 TRAPPC3O43617 180 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 MOCS2O96007 188 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 CTSWP56202 376 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 ZBTB49Q6ZSB9 765 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 NET1Q7Z628 596 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 ARPINQ7Z6K5 226 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 PEG10Q86TG7 708 aaKnown RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 PPIL6Q8IXY8 311 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 AGPAT1Q99943 283 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 LBHD1Q9BQE6 289 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 STARD13Q9Y3M8 1113 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 SF3B1O75533 1304 aaKnown RBP eCLIP8.68□□□□□ -1.021e-6■■■■■ 116.6
CHD8-201ENST00000399982 F8W810 466 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 PIK3CDO00329 1044 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 TOB2Q14106 344 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 DGKKQ5KSL6 1271 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 AAGABQ6PD74 315 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 GDAQ9Y2T3 454 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 UBOX5O94941 541 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 IRF1P10914 325 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 SDC4P31431 198 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 BTKQ06187 659 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 DRAP1Q14919 205 aaPredicted RBP8.68□□□□□ -1.02
CHD8-201ENST00000399982 PARP6Q2NL67 630 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 SH3TC2Q8TF17 1288 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 GPKOWQ92917 476 aaPredicted RBP eCLIP8.68□□□□□ -1.02
CHD8-201ENST00000399982 RNFT2Q96EX2 444 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 HEY2Q9UBP5 337 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
CHD8-201ENST00000399982 RHOBTB3O94955 611 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 ZNF846Q147U1 533 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 KRT24Q2M2I5 525 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 LRRC24Q50LG9 513 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 SGMS1Q86VZ5 419 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 MIER2Q8N344 545 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 AMER2Q8N7J2 671 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 NOA1Q8NC60 698 aaKnown RBP8.67□□□□□ -1.02
CHD8-201ENST00000399982 MKNK1Q9BUB5 465 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 EXO5Q9H790 373 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 CD274Q9NZQ7 290 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 ZNF862O60290 1169 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 ZNF24P17028 368 aa8.67□□□□□ -1.02
CHD8-201ENST00000399982 FASP25445 335 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms