RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 DOCK8Q8NF50 2099 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 TRIOBPQ9H2D6 2365 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 HHLA1C9JL84 531 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 ADAM12O43184 909 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 FAM200BP0CF97 657 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 EPCAMP16422 314 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 NPR3P17342 541 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 FECHP22830 423 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 IGFBP6P24592 240 aaPredicted RBP7.98□□□□□ -1.13
USP16-204ENST00000399976 NNTQ13423 1086 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 SLC39A12Q504Y0 691 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 ACBD5Q5T8D3 534 aaPredicted RBP7.98□□□□□ -1.13
USP16-204ENST00000399976 PM20D1Q6GTS8 502 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 RBBP8NLQ8NC74 664 aaPredicted RBP7.98□□□□□ -1.13
USP16-204ENST00000399976 PHF7Q9BWX1 381 aaPredicted RBP7.98□□□□□ -1.13
USP16-204ENST00000399976 CERS4Q9HA82 394 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 TAB2Q9NYJ8 693 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 NXF1Q9UBU9 619 aaKnown RBP7.98□□□□□ -1.13
USP16-204ENST00000399976 LCMT1Q9UIC8 334 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 SCML2Q9UQR0 700 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 I3L4J1 428 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 SEC24AO95486 1093 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 SOX5P35711 763 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 STAT1P42224 750 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 GABRB2P47870 512 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 UBXN1Q04323 297 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 ADCY1Q08828 1119 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 ATAT1Q5SQI0 421 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 IQCEQ6IPM2 695 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 TADA2BQ86TJ2 420 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 ZNF397Q8NF99 534 aaPredicted RBP7.98□□□□□ -1.13
USP16-204ENST00000399976 SYT11Q9BT88 431 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 CLIC5Q9NZA1 410 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 DNAJC12Q9UKB3 198 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 CAPN11Q9UMQ6 739 aa7.98□□□□□ -1.13
USP16-204ENST00000399976 MKI67P46013 3256 aaKnown RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 ANHXE9PGG2 379 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 LATS1O95835 1130 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 ERBB2P04626 1255 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 HMGA1P17096 107 aaKnown RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 SLC9A1P19634 815 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 IGFBP4P22692 258 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 LMO2P25791 158 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 PTK2Q05397 1052 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 GSE1Q14687 1217 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 SPOPLQ6IQ16 392 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 MTSS1LQ765P7 747 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 OTOP3Q7RTS5 596 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 DDX42Q86XP3 938 aaKnown RBP eCLIP7.97□□□□□ -1.13
USP16-204ENST00000399976 ADHFE1Q8IWW8 467 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 PPM1KQ8N3J5 372 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 UBE2Q2Q8WVN8 375 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 BAP1Q92560 729 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 CYFIP2Q96F07 1278 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 VCPIP1Q96JH7 1222 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 CALR3Q96L12 384 aaKnown RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 ZNF512Q96ME7 567 aaPredicted RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 LSM14BQ9BX40 385 aaKnown RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 UBE2TQ9NPD8 197 aaPredicted RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 CNGB3Q9NQW8 809 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 COL4A3Q01955 1670 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 MYBPHLA2RUH7 354 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 PRRG1O14668 218 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 ATF6P18850 670 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 UBASH3AP57075 661 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 ZBED6P86452 979 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 SYCP1Q15431 976 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 MDH1BQ5I0G3 518 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 CLEC20AQ6ZU45 233 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 VSTM4Q8IW00 320 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 NUP93Q8N1F7 819 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 C1orf131Q8NDD1 294 aaKnown RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.97□□□□□ -1.13
USP16-204ENST00000399976 SLC7A14Q8TBB6 771 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 SLC35F5Q8WV83 523 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 ASB2Q96Q27 587 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 PI4K2AQ9BTU6 479 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 SLC4A5Q9BY07 1137 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 ASAH2Q9NR71 780 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 TMLHEQ9NVH6 421 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 CLDND1Q9NY35 253 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 RRN3Q9NYV6 651 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 IGSF9Q9P2J2 1179 aa7.97□□□□□ -1.13
USP16-204ENST00000399976 SLC38A8A6NNN8 435 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 ECI2O75521 394 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 F11P03951 625 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 ATP1A3P13637 1013 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 TBX2Q13207 712 aaPredicted RBP7.96□□□□□ -1.13
USP16-204ENST00000399976 SCARA3Q6AZY7 606 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 MSANTD2Q6P1R3 559 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 C1orf228Q6PIY5 440 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 LUZP1Q86V48 1076 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 MSANTD4Q8NCY6 345 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 AUTS2Q8WXX7 1259 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 DDX1Q92499 740 aaKnown RBP7.96□□□□□ -1.13
USP16-204ENST00000399976 TWNKQ96RR1 684 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 VPS16Q9H269 839 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 IL21Q9HBE4 155 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 CYP4F11Q9HBI6 524 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 OLA1Q9NTK5 396 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms