RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 WDR44Q5JSH3 913 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 IER5LQ5T953 404 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TRIM59Q8IWR1 403 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CRYBG2Q8N1P7 616 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 MLKLQ8NB16 471 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 WHAMMQ8TF30 809 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 KCNK16Q96T55 309 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 MED10Q9BTT4 135 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CYP3A43Q9HB55 503 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ZFP14Q9HCL3 533 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FBXL21Q9UKT6 434 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CILPO75339 1184 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 NOL4O94818 638 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FGF19O95750 216 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 LRMPQ12912 555 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GRM2Q14416 872 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 DENND5BQ6ZUT9 1274 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 BMP8AQ7Z5Y6 402 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 UNC93AQ86WB7 457 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CREBRFQ8IUR6 639 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ARID3BQ8IVW6 561 aaPredicted RBP14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FUKQ8N0W3 1084 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SIX5Q8N196 739 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SLC2A14Q8TDB8 520 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ELSPBP1Q96BH3 223 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 RSPRY1Q96DX4 576 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 MYRFLQ96LU7 910 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GCNAQ96QF7 691 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SLC46A2Q9BY10 475 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GPR88Q9GZN0 384 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ELOVL4Q9GZR5 314 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CA14Q9ULX7 337 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ZDBF2Q9HCK1 2354 aa14.98□□□□□ -0.01
HLA-DQB1-202ENST00000399079 KRBA1A5PL33 1030 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TRIM66O15016 1216 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TADA3O75528 432 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GNA14O95837 355 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ANXA13P27216 316 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 MARSP56192 900 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 KCNH2Q12809 1159 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ARHGAP15Q53QZ3 475 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TXNDC8Q6A555 127 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 VITQ6UXI7 678 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FAM35AQ86V20 835 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 MAB21L3Q8N8X9 362 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TRMT2BQ96GJ1 504 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SPATA17Q96L03 361 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 C8orf48Q96LL4 319 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 NT5C1AQ9BXI3 368 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SMG9Q9H0W8 520 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TASP1Q9H6P5 420 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TRPV4Q9HBA0 871 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SLC2A4RGQ9NR83 387 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CISHQ9NSE2 258 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 PTPRDP23468 1912 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 BEST1O76090 585 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 PRAMEF12O95522 483 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 COL9A1P20849 921 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 IRF2BP1Q8IU81 584 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FBXL6Q8N531 539 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 LRRC3BQ96PB8 259 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 KRT82Q9NSB4 513 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 UXTQ9UBK9 157 aaPredicted RBP14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 WNT16Q9UBV4 365 aa14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.97□□□□□ -0.01
HLA-DQB1-202ENST00000399079 HEPACAM2A8MVW5 462 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 AP1G2O75843 785 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 FGFR1OPO95684 399 aaKnown RBP14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CCDC192P0DO97 292 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 NPR3P17342 541 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 ADORA2BP29275 332 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 IFRD2Q12894 506 aaPredicted RBP14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 HSP90AA4PQ58FG1 418 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CMTM8Q8IZV2 173 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 FLCNQ8NFG4 579 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 LMO3Q8TAP4 145 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CYFIP2Q96F07 1278 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SMARCD1Q96GM5 515 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CNOT6LQ96LI5 555 aaKnown RBP14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SLC22A12Q96S37 553 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CYP2S1Q96SQ9 504 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SMOQ99835 787 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 MFSD1Q9H3U5 465 aa14.96□□□□□ -0.02
HLA-DQB1-202ENST00000399079 COL4A3Q01955 1670 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 PMM2O15305 246 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 AFPP02771 609 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 PSMC3P17980 439 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 VCPP55072 806 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 MAP3K7CLP57077 242 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CUL2Q13617 745 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 TPD52L1Q16890 204 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 RBM43Q6ZSC3 357 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 MFSD6LQ8IWD5 586 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SUGP1Q8IWZ8 645 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SLC4A11Q8NBS3 891 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 ZMIZ2Q8NF64 920 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SCAMP5Q8TAC9 235 aa14.95□□□□□ -0.02
HLA-DQB1-202ENST00000399079 MRPS31Q92665 395 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms