RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 CDO1Q16878 200 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 RFWD3Q6PCD5 774 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 BZW1Q7L1Q6 419 aaKnown RBP20.48■□□□□ 0.87
COL13A1-205ENST00000398978 TDRPQ86YL5 185 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 CDHR1Q96JP9 859 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 NLRP4Q96MN2 994 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 KANSL3Q9P2N6 904 aa20.48■□□□□ 0.87
COL13A1-205ENST00000398978 FAM189A1O60320 539 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 MSCO60682 206 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 KDELR1P24390 212 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-205ENST00000398978 STAT5BP51692 787 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 ARL4CP56559 192 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 SESN3P58005 492 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 NR1H3Q13133 447 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 CCDC142Q17RM4 750 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 EFHC2Q5JST6 749 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 DRICH1Q6PGQ1 229 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-205ENST00000398978 TTC17Q96AE7 1141 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 FBXO6Q9NRD1 293 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-205ENST00000398978 CFAP69A5D8W1 941 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 PIGRP01833 764 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 ERBB2P04626 1255 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 ALDH3A1P30838 453 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 ASPAP45381 313 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 DUOXA2Q1HG44 320 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 PPIL6Q8IXY8 311 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 NAT8LQ8N9F0 302 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 A0A1B0GUA9 196 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 TCF7P36402 384 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-205ENST00000398978 ELK3P41970 407 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 EIF3EP60228 445 aaKnown RBP20.47■□□□□ 0.87
COL13A1-205ENST00000398978 EEF1DP3Q658K8 133 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 UBA3Q8TBC4 463 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 TRIM56Q9BRZ2 755 aaKnown RBP20.47■□□□□ 0.87
COL13A1-205ENST00000398978 FOXP3Q9BZS1 431 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 LRMDAQ9H2I8 198 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 SLC5A4Q9NY91 659 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 SNCAIPQ9Y6H5 919 aa20.47■□□□□ 0.87
COL13A1-205ENST00000398978 SPDYE16A6NNV3 312 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-205ENST00000398978 C1orf228Q6PIY5 440 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 WDR49Q8IV35 697 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 SERAC1Q96JX3 654 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 FAM111AQ96PZ2 611 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 RAB3IPQ96QF0 476 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-205ENST00000398978 PEX11AO75192 247 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 PRKCBP05771 671 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 CXCL8P10145 99 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 RBP3P10745 1247 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 RAD23BP54727 409 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 CCDC15Q0P6D6 951 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 RFX8Q6ZV50 586 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 ATP11CQ8NB49 1132 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 NUDCD1Q96RS6 583 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 SDCBP2Q9H190 292 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 SMYD3Q9H7B4 428 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 RGPD3A6NKT7 1758 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-205ENST00000398978 RGPD4Q7Z3J3 1758 aa20.46■□□□□ 0.87
COL13A1-205ENST00000398978 HMGB2P26583 209 aaKnown RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 MIPP30301 263 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 YWHAGP61981 247 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 TAF11Q15544 211 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 SGSM1Q2NKQ1 1148 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 LRRC38Q5VT99 294 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 SPATA18Q8TC71 538 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 DCAKDQ8WVC6 231 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 PIWIL1Q96J94 861 aaKnown RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 GPATCH2LQ9NWQ4 482 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 DDX56Q9NY93 547 aaKnown RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 INO80B-WBP1J3KQ70 363 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 TOM1L1O75674 476 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 HOXC6P09630 235 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 FAAP100Q0VG06 881 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 LAMTOR4Q0VGL1 99 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 KBTBD12Q3ZCT8 623 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 CNKSR2Q8WXI2 1034 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 CFAP36Q96G28 342 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 ACO2Q99798 780 aaKnown RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 INO80BQ9C086 356 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 XYLT2Q9H1B5 865 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 DENND2DQ9H6A0 471 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 SLC24A3Q9HC58 644 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 SLC24A2Q9UI40 661 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 DCTN3O75935 186 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 FARP2O94887 1054 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 BGNP21810 368 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 SMAD1Q15797 465 aaKnown RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 C15orf59Q2T9L4 293 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 TTC7BQ86TV6 843 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 RPAINQ86UA6 219 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 MICAL1Q8TDZ2 1067 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 MIPEPQ99797 713 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 MRPL4Q9BYD3 311 aaKnown RBP20.45■□□□□ 0.86
COL13A1-205ENST00000398978 HEY2Q9UBP5 337 aa20.45■□□□□ 0.86
COL13A1-205ENST00000398978 KBTBD13C9JR72 458 aa20.44■□□□□ 0.86
COL13A1-205ENST00000398978 ANGEL2Q5VTE6 544 aaKnown RBP20.44■□□□□ 0.86
COL13A1-205ENST00000398978 CATSPERGQ6ZRH7 1159 aa20.44■□□□□ 0.86
COL13A1-205ENST00000398978 CEP128Q6ZU80 1094 aa20.44■□□□□ 0.86
COL13A1-205ENST00000398978 PRPF39Q86UA1 669 aaKnown RBP20.44■□□□□ 0.86
COL13A1-205ENST00000398978 ZNF276Q8N554 614 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms