RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 ATP2A3Q93084 1043 aa11.14□□□□□ -0.63
USP19-204ENST00000398896 NRBF2Q96F24 287 aa11.14□□□□□ -0.63
USP19-204ENST00000398896 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
USP19-204ENST00000398896 AGTPBP1Q9UPW5 1226 aa11.14□□□□□ -0.63
USP19-204ENST00000398896 SQORQ9Y6N5 450 aa11.14□□□□□ -0.63
USP19-204ENST00000398896 FRMPD4Q14CM0 1322 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 MRC1P22897 1456 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 SLC16A3O15427 465 aaKnown RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 RALAP11233 206 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 MSLNQ13421 630 aaPredicted RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 ART3Q13508 389 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 PLEKHG4Q58EX7 1191 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 CPVLQ9H3G5 476 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 PSTPIP2Q9H939 334 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 AAASQ9NRG9 546 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TMEM260Q9NX78 707 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 HACD3Q9P035 362 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 MAN1A2O60476 641 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 ADAM23O75077 832 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TSPAN9O75954 239 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TPPPO94811 219 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TRIM49P0CI25 452 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TRIM49CP0CI26 452 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 PTK7Q13308 1070 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 LRP8Q14114 963 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 ZNF829Q3KNS6 432 aaPredicted RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 ARL13BQ3SXY8 428 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 SNRNP48Q6IEG0 339 aaKnown RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 UGT2A3Q6UWM9 527 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 KYAT3Q6YP21 454 aaKnown RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 ZBTB46Q86UZ6 589 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 RHPN2Q8IUC4 686 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 PLEKHA8Q96JA3 519 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 FAM96AQ9H5X1 160 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 AASDHPPTQ9NRN7 309 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 SLC17A7Q9P2U7 560 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 PSMD13Q9UNM6 376 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 GTPBP10A4D1E9 387 aaKnown RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 FSCN2O14926 492 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TEX28O15482 410 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 ALAS1P13196 640 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 EEF1B2P24534 225 aaKnown RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 CASP4P49662 377 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 WDR45BQ5MNZ6 344 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 NEPROQ6NW34 567 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TDRPQ86YL5 185 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 TMEM79Q9BSE2 394 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 C12orf65Q9H3J6 166 aaKnown RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 COPS7BQ9H9Q2 264 aaPredicted RBP11.13□□□□□ -0.63
USP19-204ENST00000398896 ZNF229Q9UJW7 825 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 COG5Q9UP83 839 aa11.13□□□□□ -0.63
USP19-204ENST00000398896 ZNF839A8K0R7 811 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 MEIS1O00470 390 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 SIN3BO75182 1162 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 SEC24DO94855 1032 aaPredicted RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 CRTAMO95727 393 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 CDH2P19022 906 aaPredicted RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 ATXN3P54252 364 aaPredicted RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 GRM2Q14416 872 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 TLR1Q15399 786 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 TGFBIQ15582 683 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 CCNG2Q16589 344 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 C6orf52Q5T4I8 152 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 TTC33Q6PID6 262 aaPredicted RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 PCGF5Q86SE9 256 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 ALDH16A1Q8IZ83 802 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 MARVELD2Q8N4S9 558 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 SORCS3Q9UPU3 1222 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 HEMK1Q9Y5R4 338 aaPredicted RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 NOX1Q9Y5S8 564 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 LAMA4Q16363 1823 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 A0A087WXM4 84 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 AIM2O14862 343 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 PABPC1P11940 636 aaKnown RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 TCEA1P23193 301 aaKnown RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 IL6STP40189 918 aaPredicted RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 PHKA2P46019 1235 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 GRM4Q14833 912 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 ANKDD1AQ495B1 522 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 OGFOD2Q6N063 350 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 RWDD4Q6NW29 188 aaKnown RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 ZNF786Q8N393 782 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 PPM1NQ8N819 430 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 SLC43A3Q8NBI5 491 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 HELQQ8TDG4 1101 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 SLC35C1Q96A29 364 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 VPS45Q9NRW7 570 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 VPS51Q9UID3 782 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 ATP8B3O60423 1300 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 SPATA31A3Q5VYP0 1347 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 ATP5BP06576 529 aaKnown RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 CHRNB2P17787 502 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 RFX1P22670 979 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
USP19-204ENST00000398896 WDR78Q5VTH9 848 aa11.12□□□□□ -0.63
USP19-204ENST00000398896 TAS2R42Q7RTR8 314 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms