RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 ATXN3LQ9H3M9 355 aa13.6□□□□□ -0.23
VPREB3-202ENST00000398465 TASP1Q9H6P5 420 aa13.6□□□□□ -0.23
VPREB3-202ENST00000398465 APOBEC3GQ9HC16 384 aaKnown RBP13.6□□□□□ -0.23
VPREB3-202ENST00000398465 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
VPREB3-202ENST00000398465 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
VPREB3-202ENST00000398465 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
VPREB3-202ENST00000398465 RWDD2AQ9UIY3 292 aa13.6□□□□□ -0.23
VPREB3-202ENST00000398465 ARIH1Q9Y4X5 557 aaPredicted RBP13.6□□□□□ -0.23
VPREB3-202ENST00000398465 COL4A3Q01955 1670 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 SLC38A8A6NNN8 435 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 TADA3O75528 432 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 FGFR1OPO95684 399 aaKnown RBP13.59□□□□□ -0.23
VPREB3-202ENST00000398465 CFHP08603 1231 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 COL9A1P20849 921 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 BDNFP23560 247 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 CDR1P51861 262 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 NDST1P52848 882 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 CDH8P55286 799 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 STXBP5Q5T5C0 1151 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 GPR158Q5T848 1215 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 TMEM150AQ86TG1 271 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 SCN4BQ8IWT1 228 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 GPR152Q8TDT2 470 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 SMARCD1Q96GM5 515 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 ZSWIM3Q96MP5 696 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 RPP25Q9BUL9 199 aaKnown RBP13.59□□□□□ -0.23
VPREB3-202ENST00000398465 TTLL2Q9BWV7 592 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 MFSD1Q9H3U5 465 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 OBP2AQ9NY56 170 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 HMGXB4Q9UGU5 601 aa13.59□□□□□ -0.23
VPREB3-202ENST00000398465 P4HA2O15460 535 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 CILPO75339 1184 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 F11P03951 625 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 PFKLP17858 780 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 PSMC3P17980 439 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 GRIK1P39086 918 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 FMO5P49326 533 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 NUBP1P53384 320 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 CYP4F8P98187 520 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 CWF19L1Q69YN2 538 aaKnown RBP13.58□□□□□ -0.24
VPREB3-202ENST00000398465 TANGO2Q6ICL3 276 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 VITQ6UXI7 678 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 SIX5Q8N196 739 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 MRPS31Q92665 395 aaKnown RBP13.58□□□□□ -0.24
VPREB3-202ENST00000398465 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 NT5C1AQ9BXI3 368 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 B3GNT5Q9BYG0 378 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 KIF9Q9HAQ2 790 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.24
VPREB3-202ENST00000398465 TRPV5Q9NQA5 729 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 DACH1Q9UI36 760 aa13.58□□□□□ -0.24
VPREB3-202ENST00000398465 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
VPREB3-202ENST00000398465 F8VP50 259 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 PDGFBP01127 241 aaPredicted RBP13.57□□□□□ -0.24
VPREB3-202ENST00000398465 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 PPP3CCP48454 512 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 PDE6CP51160 858 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 CLCN5P51795 746 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 GPC5P78333 572 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 PRKCQQ04759 706 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 CETN1Q12798 172 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 ACOT1Q86TX2 421 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 MFSD6LQ8IWD5 586 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 FUKQ8N0W3 1084 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 PRRX2Q99811 253 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 TRMT61BQ9BVS5 477 aaKnown RBP13.57□□□□□ -0.24
VPREB3-202ENST00000398465 KRT82Q9NSB4 513 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 NCANO14594 1321 aa13.57□□□□□ -0.24
VPREB3-202ENST00000398465 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 HEPACAM2A8MVW5 462 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 RTN3O95197 1032 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 AOC1P19801 751 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 AVPR1AP37288 418 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 CACNA2D1P54289 1103 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 STX17P56962 302 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 YWHAEP62258 255 aaKnown RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 CUL2Q13617 745 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 ZNF268Q14587 947 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 MON1AQ86VX9 555 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 ARID3BQ8IVW6 561 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 CMTM8Q8IZV2 173 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 ST13P5Q8NFI4 369 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-202ENST00000398465 SLC2A14Q8TDB8 520 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 OVCA2Q8WZ82 227 aa13.56□□□□□ -0.24
VPREB3-202ENST00000398465 IRF7Q92985 503 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms