RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TMTC4Q5T4D3 741 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 ARHGEF26Q96DR7 871 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 EGFL8Q99944 293 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 CINPQ9BW66 212 aaPredicted RBP16.07■□□□□ 0.16
LSS-202ENST00000397728 RGPD5Q99666 1765 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 GNRH1P01148 92 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 MTM1Q13496 603 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 POLD3Q15054 466 aaPredicted RBP16.07■□□□□ 0.16
LSS-202ENST00000397728 THEMIS2Q5TEJ8 643 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 RNF135Q8IUD6 432 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 TMEM86AQ8N2M4 240 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 ABCB6Q9NP58 842 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 CHST12Q9NRB3 414 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 ZFATQ9P243 1243 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 MOXD2PA6NHM9 499 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 FGBP02675 491 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
LSS-202ENST00000397728 GCNT1Q02742 428 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 HIF1AQ16665 826 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 MMEL1Q495T6 779 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 CNTNAP1P78357 1384 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 CFAP69A5D8W1 941 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CARNS1A5YM72 827 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 COPEO14579 308 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 MAPK13O15264 365 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 LSM8O95777 96 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 TAC1P20366 129 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 EIF3BP55884 814 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 STX1BP61266 288 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CCZ1BP86790 482 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CCZ1P86791 482 aaPredicted RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 CBWD6Q4V339 395 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CBWD3Q5JTY5 395 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CBWD5Q5RIA9 395 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 E4F1Q66K89 784 aaPredicted RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 PPHLN1Q8NEY8 458 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 CNPY3Q9BT09 278 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 APOL5Q9BWW9 433 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 LYPLA2O95372 231 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 GZMAP12544 262 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CCDC130P13994 396 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 ICAM3P32942 547 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 DLG4P78352 724 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 AMPD2Q01433 879 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 GPATCH11Q8N954 259 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 GPR63Q9BZJ6 419 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 G3BP2Q9UN86 482 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 MYO9BQ13459 2157 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 KCNA3P22001 575 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 PPP3CAQ08209 521 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CCDC15Q0P6D6 951 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 ECM1Q16610 540 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 ATP11CQ8NB49 1132 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 CAPS2Q9BXY5 557 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 SMYD3Q9H7B4 428 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 COL1A2P08123 1366 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 PHF20L1A8MW92 1017 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 MAP3K7O43318 606 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 PMPCBO75439 489 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 MAP2K2P36507 400 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 DHX34Q14147 1143 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 RBM23Q86U06 439 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 SCUBE3Q8IX30 993 aa16.06■□□□□ 0.16
LSS-202ENST00000397728 GSPT2Q8IYD1 628 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 TRMT13Q9NUP7 481 aaKnown RBP16.06■□□□□ 0.16
LSS-202ENST00000397728 ZMYM2Q9UBW7 1377 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 CHEK2O96017 543 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 PPM1AP35813 382 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ACLYP53396 1101 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 YWHAZP63104 245 aaKnown RBP16.05■□□□□ 0.16
LSS-202ENST00000397728 GTF2H3Q13889 308 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 KLHL38Q2WGJ6 581 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 SAPCD2Q86UD0 394 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ANKMY2Q8IV38 441 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ARHGAP24Q8N264 748 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 GIT1Q9Y2X7 761 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 IPPQ9Y573 584 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ADRB2P07550 413 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 KCNJ1P48048 391 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 HTRA3P83110 453 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 RASSF3Q86WH2 238 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ADAM32Q8TC27 787 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 TTC17Q96AE7 1141 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 TEPSINQ96N21 525 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 PLA2G4CQ9UP65 541 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ADCY2Q08462 1091 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 USP41Q3LFD5 358 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 SLC24A5Q71RS6 500 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 THG1LQ9NWX6 298 aaKnown RBP16.05■□□□□ 0.16
LSS-202ENST00000397728 INTUQ9ULD6 942 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 RHOCP08134 193 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 SP100P23497 879 aaPredicted RBP16.05■□□□□ 0.16
LSS-202ENST00000397728 RTP1P59025 263 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms