RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CDH9Q9ULB4 789 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 RIMKLBQ9ULI2 386 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 DOCK4Q8N1I0 1966 aa6.16□□□□□ -1.42
PTPRD-206ENST00000397617 H0YGN5 161 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 CHADO15335 359 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 PSMD3O43242 534 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 OPHN1O60890 802 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 SASH3O75995 380 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 NR1D1P20393 614 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ECHS1P30084 290 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ASPAP45381 313 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 BNIPLQ7Z465 357 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ARHGEF19Q8IW93 802 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 OR5B17Q8NGF7 314 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 SCLT1Q96NL6 688 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ELOVL4Q9GZR5 314 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 TRPV2Q9Y5S1 764 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 NFS1Q9Y697 457 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 TNPO2O14787 897 aaKnown RBP6.15□□□□□ -1.42
PTPRD-206ENST00000397617 POLD2P49005 469 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 KPNA1P52294 538 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-206ENST00000397617 GRIK3Q13003 919 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 TUSC3Q13454 348 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 SLC9A4Q6AI14 798 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 KIAA0408Q6ZU52 694 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ARHGAP18Q8N392 663 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ZNF557Q8N988 423 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-206ENST00000397617 SLC35F5Q8WV83 523 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 CYTH2Q99418 400 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 PACSIN1Q9BY11 444 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 GRHL1Q9NZI5 618 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 MCF2LO15068 1137 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 RHOXF2BP0C7M4 288 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 MATKP42679 507 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 CDKN2BP42772 138 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 TNK2Q07912 1038 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 PTK7Q13308 1070 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 MMS22LQ6ZRQ5 1243 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ARHGEF18Q6ZSZ5 1173 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 OR6J1Q8NGC5 347 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 TOX2Q96NM4 488 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 RHOXF2Q9BQY4 288 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 ACBD6Q9BR61 282 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 HDAC6Q9UBN7 1215 aa6.15□□□□□ -1.42
PTPRD-206ENST00000397617 hCG_1818297A0A087WSY0 165 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 KLF11O14901 512 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 FTCDO95954 541 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 FAM189BP81408 668 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 DHX9Q08211 1270 aaKnown RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 SNX17Q15036 470 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 CCDC142Q17RM4 750 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 SLC47A2Q86VL8 602 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 ATXN2LQ8WWM7 1075 aaKnown RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 C11orf84Q9BUA3 381 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 TRPC7Q9HCX4 862 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 EURLQ9NYK6 297 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 MGAMO43451 1857 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 A0A0U1RQF3 1178 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 XPO1O14980 1071 aaKnown RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 COBLO75128 1261 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF865P0CJ78 1059 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 CYBAP13498 195 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 HOXA11P31270 313 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 NOS2P35228 1153 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 PTGIRP43119 386 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 RAD23BP54727 409 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 ARL4CP56559 192 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 FAM91A1Q658Y4 838 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 RHPN2Q8IUC4 686 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 KRT12Q99456 494 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 EFCC1Q9HA90 598 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 OSGEPQ9NPF4 335 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 PTPRDP23468 1912 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 DNALI1O14645 258 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 SYN3O14994 580 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 CD19P15391 556 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 ABCB4P21439 1286 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 IFNAR2P48551 515 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 SLC6A3Q01959 620 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 SNX1Q13596 522 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 KRT71Q3SY84 523 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 PTPN20Q4JDL3 420 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 CCDC38Q502W7 563 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 MARCH8Q5T0T0 291 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 EEF1DP3Q658K8 133 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 KLHDC9Q8NEP7 349 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 SLC20A1Q8WUM9 679 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 DDX47Q9H0S4 455 aaKnown RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 APOBEC3GQ9HC16 384 aaKnown RBP6.15□□□□□ -1.43
PTPRD-206ENST00000397617 TRHDEQ9UKU6 1024 aa6.15□□□□□ -1.43
PTPRD-206ENST00000397617 FAM92AA1XBS5 289 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 MAGEB16A2A368 324 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 GPR25O00155 361 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ATP5HO75947 161 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 FDFT1P37268 417 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 ACOT2P49753 483 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 PURAQ00577 322 aaKnown RBP6.14□□□□□ -1.43
PTPRD-206ENST00000397617 RING1Q06587 406 aa6.14□□□□□ -1.43
PTPRD-206ENST00000397617 MESDQ14696 234 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms