RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SLC9A7Q96T83 725 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 ZCWPW1Q9H0M4 648 aa29.05■■■□□ 2.24
CPNE1-203ENST00000397442 PTPRDP23468 1912 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 BUB1BO60566 1050 aaPredicted RBP29.04■■■□□ 2.24
CPNE1-203ENST00000397442 BEST1O76090 585 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 CASQ1P31415 396 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 RPL34P49207 117 aaKnown RBP29.04■■■□□ 2.24
CPNE1-203ENST00000397442 RGS7P49802 495 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 GSCP56915 257 aaPredicted RBP29.04■■■□□ 2.24
CPNE1-203ENST00000397442 TSPY1Q01534 308 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 CLEC20AQ6ZU45 233 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 SLFN11Q7Z7L1 901 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 XYLT1Q86Y38 959 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 PHOSPHO2Q8TCD6 241 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 MED10Q9BTT4 135 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 GOLPH3Q9H4A6 298 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 TMEM30AQ9NV96 361 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 STRIP2Q9ULQ0 834 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 INSL6Q9Y581 213 aa29.04■■■□□ 2.24
CPNE1-203ENST00000397442 TBC1D4O60343 1298 aa29.03■■■□□ 2.24
CPNE1-203ENST00000397442 NPR3P17342 541 aa29.03■■■□□ 2.24
CPNE1-203ENST00000397442 PLA2G4AP47712 749 aa29.03■■■□□ 2.24
CPNE1-203ENST00000397442 TMEM110Q86TL2 294 aa29.03■■■□□ 2.24
CPNE1-203ENST00000397442 TTPALQ9BTX7 342 aa29.03■■■□□ 2.24
CPNE1-203ENST00000397442 ST7Q9NRC1 585 aa29.03■■■□□ 2.24
CPNE1-203ENST00000397442 KRT82Q9NSB4 513 aa29.03■■■□□ 2.24
CPNE1-203ENST00000397442 E5RJQ4 531 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 OR4Q2P0C623 313 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 CACNA2D1P54289 1103 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 MAPRE1Q15691 268 aaKnown RBP29.02■■■□□ 2.24
CPNE1-203ENST00000397442 CTXN3Q4LDR2 81 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 PPP1R15BQ5SWA1 713 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 MSANTD4Q8NCY6 345 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 C3orf20Q8ND61 904 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 CALR3Q96L12 384 aaKnown RBP29.02■■■□□ 2.24
CPNE1-203ENST00000397442 ZBED2Q9BTP6 218 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 RHOBTB2Q9BYZ6 727 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 TRIM7Q9C029 511 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 PARVAQ9NVD7 372 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 XPO1O14980 1071 aaKnown RBP29.02■■■□□ 2.24
CPNE1-203ENST00000397442 GJB6O95452 261 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 FAM200BP0CF97 657 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 ATP2A2P16615 1042 aaKnown RBP29.02■■■□□ 2.24
CPNE1-203ENST00000397442 ZNF280DQ6N043 979 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 SP7Q8TDD2 431 aaPredicted RBP29.02■■■□□ 2.24
CPNE1-203ENST00000397442 SMOQ99835 787 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 SYNCQ9H7C4 482 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 CHST7Q9NS84 486 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 SCINQ9Y6U3 715 aa29.02■■■□□ 2.24
CPNE1-203ENST00000397442 CAPN15O75808 1086 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 ZNF268Q14587 947 aaPredicted RBP29.01■■■□□ 2.23
CPNE1-203ENST00000397442 RSPO2Q6UXX9 243 aaPredicted RBP29.01■■■□□ 2.23
CPNE1-203ENST00000397442 FIBCD1Q8N539 461 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 ZMIZ2Q8NF64 920 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 IPO4Q8TEX9 1081 aaKnown RBP29.01■■■□□ 2.23
CPNE1-203ENST00000397442 MCRS1Q96EZ8 462 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 RAD9AQ99638 391 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 NAPGQ99747 312 aaPredicted RBP29.01■■■□□ 2.23
CPNE1-203ENST00000397442 MRPL47Q9HD33 250 aaKnown RBP29.01■■■□□ 2.23
CPNE1-203ENST00000397442 ABCB6Q9NP58 842 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 SPG21Q9NZD8 308 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 JRKLQ9Y4A0 524 aa29.01■■■□□ 2.23
CPNE1-203ENST00000397442 LAMA2P24043 3122 aaKnown RBP29■■■□□ 2.23
CPNE1-203ENST00000397442 CTAGE9A4FU28 777 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 CARNS1A5YM72 827 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 PIK3R2O00459 728 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 ENC1O14682 589 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 AP1G2O75843 785 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 ATP1A1P05023 1023 aaKnown RBP29■■■□□ 2.23
CPNE1-203ENST00000397442 USP41Q3LFD5 358 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 ANKS3Q6ZW76 656 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 PIGZQ86VD9 579 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 CLP1Q92989 425 aaKnown RBP29■■■□□ 2.23
CPNE1-203ENST00000397442 SMARCD1Q96GM5 515 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 BTBD6Q96KE9 485 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 CYLDQ9NQC7 956 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 WDR35Q9P2L0 1181 aa29■■■□□ 2.23
CPNE1-203ENST00000397442 OR6C75A6NL08 312 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 FTCDO95954 541 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 SLC39A12Q504Y0 691 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 DNAJC24Q6P3W2 148 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 PRSS55Q6UWB4 352 aaPredicted RBP28.99■■■□□ 2.23
CPNE1-203ENST00000397442 DAAM2Q86T65 1068 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 TMEM169Q96HH4 297 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 HSFY1Q96LI6 401 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 KCNK16Q96T55 309 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 CSNK1G1Q9HCP0 422 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 ANAPC7Q9UJX3 599 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 SOD2P04179 222 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 BDNFP23560 247 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 MAP3K7CLP57077 242 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 RPL7AP62424 266 aaKnown RBP28.99■■■□□ 2.23
CPNE1-203ENST00000397442 C11orf63Q6NUN7 778 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 DCP1BQ8IZD4 617 aaKnown RBP28.99■■■□□ 2.23
CPNE1-203ENST00000397442 FEZF2Q8TBJ5 459 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 TLR10Q9BXR5 811 aa28.99■■■□□ 2.23
CPNE1-203ENST00000397442 MTIF3Q9H2K0 278 aaKnown RBP28.99■■■□□ 2.23
CPNE1-203ENST00000397442 LCHNA4D1U4 455 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 TMEM191CA6NGB0 347 aa28.98■■■□□ 2.23
CPNE1-203ENST00000397442 H7C4K7 107 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms