RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TBC1D17Q9HA65 648 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 TMEM8AQ9HCN3 771 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 OBP2AQ9NY56 170 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 EHD2Q9NZN4 543 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 MAGED2Q9UNF1 606 aaPredicted RBP15.52■□□□□ 0.07
SEC13-208ENST00000397109 HEPACAM2A8MVW5 462 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 DPYSL4O14531 572 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 TRIM66O15016 1216 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 TRIM49P0CI25 452 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 TRIM49CP0CI26 452 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 TRIM21P19474 475 aaKnown RBP15.51■□□□□ 0.07
SEC13-208ENST00000397109 BDNFP23560 247 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 ANXA13P27216 316 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 GRIK1P39086 918 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 VIPR2P41587 438 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 CDH8P55286 799 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 STARD6P59095 220 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 PPP3CAQ08209 521 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 MLF2Q15773 248 aaPredicted RBP15.51■□□□□ 0.07
SEC13-208ENST00000397109 CCDC142Q17RM4 750 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 IER5LQ5T953 404 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 SDHAF4Q5VUM1 108 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 CWF19L1Q69YN2 538 aaKnown RBP15.51■□□□□ 0.07
SEC13-208ENST00000397109 KRT39Q6A163 491 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 VITQ6UXI7 678 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 YAF2Q8IY57 180 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 TMEM105Q8N8V8 129 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 RNF214Q8ND24 703 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 MRPS31Q92665 395 aaKnown RBP15.51■□□□□ 0.07
SEC13-208ENST00000397109 DNASE1L2Q92874 299 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 IRF7Q92985 503 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 FAM122AQ96E09 287 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 ELOVL4Q9GZR5 314 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 IRF2BPLQ9H1B7 796 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 TRPV5Q9NQA5 729 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 NME7Q9Y5B8 376 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 KMT2EQ8IZD2 1858 aa15.51■□□□□ 0.07
SEC13-208ENST00000397109 ATP8B3O60423 1300 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 CACNA1HO95180 2353 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 F5P12259 2224 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 BIN1O00499 593 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 PTPN5P54829 565 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 CYP4F8P98187 520 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 STXBP5Q5T5C0 1151 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 ISM2Q6H9L7 571 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 FOXR2Q6PJQ5 311 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 SCARA5Q6ZMJ2 495 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 UNC93AQ86WB7 457 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 MLKLQ8NB16 471 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 EEF2KMTQ96G04 330 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 FAXDC2Q96IV6 333 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 C8orf48Q96LL4 319 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 BPIFA3Q9BQP9 254 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 DNAI2Q9GZS0 605 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 CYP3A43Q9HB55 503 aa15.5■□□□□ 0.07
SEC13-208ENST00000397109 PTPRDP23468 1912 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 DENND4CQ5VZ89 1909 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 ZNF263O14978 683 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 GDI1P31150 447 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 PLA2G5P39877 138 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 RAP1GAPP47736 663 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 ZNF165P49910 485 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 MXI1P50539 228 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 PMS1P54277 932 aaKnown RBP15.49■□□□□ 0.07
SEC13-208ENST00000397109 NOP14P78316 857 aaKnown RBP15.49■□□□□ 0.07
SEC13-208ENST00000397109 GRM2Q14416 872 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 ANO6Q4KMQ2 910 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 TMEM150AQ86TG1 271 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 CMTM8Q8IZV2 173 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 TAS1R2Q8TE23 839 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 CEP63Q96MT8 703 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 SLC46A2Q9BY10 475 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 BCO2Q9BYV7 579 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 SDCBP2Q9H190 292 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 DPEP3Q9H4B8 488 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 MMRN2Q9H8L6 949 aa15.49■□□□□ 0.07
SEC13-208ENST00000397109 METTL14Q9HCE5 456 aaKnown RBP15.49■□□□□ 0.07
SEC13-208ENST00000397109 BICDL2A1A5D9 508 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 PPP1R3GB7ZBB8 358 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 CHADO15335 359 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 GALR2O43603 387 aaPredicted RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 CD44P16070 742 aaKnown RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 AVPR1AP37288 418 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 FCHO2Q0JRZ9 810 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 CT47A1Q5JQC4 288 aaPredicted RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 TCERG1LQ5VWI1 586 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 SPOPLQ6IQ16 392 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 DENND5BQ6ZUT9 1274 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 FILIP1Q7Z7B0 1213 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 MON1AQ86VX9 555 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 CRYBG2Q8N1P7 616 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 CELF5Q8N6W0 485 aaKnown RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 FBXL13Q8NEE6 735 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 PRSS33Q8NF86 280 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 NELL2Q99435 816 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 DDX23Q9BUQ8 820 aaKnown RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 B3GNT5Q9BYG0 378 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 NIF3L1Q9GZT8 377 aa15.48■□□□□ 0.07
SEC13-208ENST00000397109 ARMCX3Q9UH62 379 aaPredicted RBP15.48■□□□□ 0.07
SEC13-208ENST00000397109 SIT1Q9Y3P8 196 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms