RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ABCD1P33897 745 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 SIM1P81133 766 aaPredicted RBP16.09■□□□□ 0.17
SEC13-206ENST00000397102 POU5F1Q01860 360 aaKnown RBP16.09■□□□□ 0.17
SEC13-206ENST00000397102 SEMA3BQ13214 749 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 KCNB1Q14721 858 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 TMEM119Q4V9L6 283 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 SPDYCQ5MJ68 293 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 SLC23A3Q6PIS1 610 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 TMEM92Q6UXU6 159 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 TTC30AQ86WT1 665 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 CCDC33Q8N5R6 958 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 MYCT1Q8N699 235 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 ARL14EPQ8N8R7 260 aaPredicted RBP16.09■□□□□ 0.17
SEC13-206ENST00000397102 FSIP1Q8NA03 581 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 WHAMMQ8TF30 809 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 FNBP1Q96RU3 617 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 ACBD6Q9BR61 282 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 LINC00597Q9H2U6 94 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 TMEM74BQ9NUR3 256 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 ARHGAP26Q9UNA1 814 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 CEP192Q8TEP8 1941 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 ADAMTS9Q9P2N4 1935 aa16.09■□□□□ 0.17
SEC13-206ENST00000397102 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 ANTXRLA6NF34 631 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 MAP3K13O43283 966 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 TRAK2O60296 914 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 FAM13AO94988 1023 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 HNRNPLP14866 589 aaKnown RBP eCLIP16.08■□□□□ 0.16
SEC13-206ENST00000397102 RDXP35241 583 aaKnown RBP16.08■□□□□ 0.16
SEC13-206ENST00000397102 PNPLA4P41247 253 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 PTGER3P43115 390 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 ZNF131P52739 623 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 ATP2C1P98194 919 aaPredicted RBP16.08■□□□□ 0.16
SEC13-206ENST00000397102 GAB4Q2WGN9 574 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 HSF5Q4G112 596 aaPredicted RBP16.08■□□□□ 0.16
SEC13-206ENST00000397102 ZC2HC1CQ53FD0 456 aaPredicted RBP16.08■□□□□ 0.16
SEC13-206ENST00000397102 INTS6LQ5JSJ4 861 aaKnown RBP16.08■□□□□ 0.16
SEC13-206ENST00000397102 PEAR1Q5VY43 1037 aaPredicted RBP16.08■□□□□ 0.16
SEC13-206ENST00000397102 ADALQ6DHV7 355 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 ARMCX6Q7L4S7 300 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 NT5DC4Q86YG4 428 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 TMEFF1Q8IYR6 380 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 RLN3Q8WXF3 142 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 DDX43Q9NXZ2 648 aaKnown RBP16.08■□□□□ 0.16
SEC13-206ENST00000397102 CACNA1EQ15878 2313 aa16.08■□□□□ 0.16
SEC13-206ENST00000397102 C2orf78A6NCI8 922 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 ANKRD63C9JTQ0 380 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 HDCP19113 662 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 HOXD12P35452 270 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 PDE6CP51160 858 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 GTF2BQ00403 316 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 MYL7Q01449 175 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 BYSLQ13895 437 aaKnown RBP16.07■□□□□ 0.16
SEC13-206ENST00000397102 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 LYSMD4Q5XG99 296 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 SLFN12LQ6IEE8 588 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 PROSER1Q86XN7 944 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 PDCL2Q8N4E4 241 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 FIZ1Q96SL8 496 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 PKMYT1Q99640 499 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 POLMQ9NP87 494 aaPredicted RBP16.07■□□□□ 0.16
SEC13-206ENST00000397102 PILRBQ9UKJ0 227 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 AGO2Q9UKV8 859 aaKnown RBP16.07■□□□□ 0.16
SEC13-206ENST00000397102 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
SEC13-206ENST00000397102 L1RE1Q9UN81 338 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 STYXL1Q9Y6J8 313 aa16.07■□□□□ 0.16
SEC13-206ENST00000397102 ANKRD11Q6UB99 2663 aaPredicted RBP16.07■□□□□ 0.16
SEC13-206ENST00000397102 PCDH15Q96QU1 1955 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 ATXN2Q99700 1313 aaKnown RBP16.06■□□□□ 0.16
SEC13-206ENST00000397102 KLF8O95600 359 aaPredicted RBP16.06■□□□□ 0.16
SEC13-206ENST00000397102 CAPNS1P04632 268 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 PFKLP17858 780 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 ACAT1P24752 427 aaKnown RBP16.06■□□□□ 0.16
SEC13-206ENST00000397102 ATXN3P54252 364 aaPredicted RBP16.06■□□□□ 0.16
SEC13-206ENST00000397102 MAP7D1Q3KQU3 841 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 TMEM86AQ8N2M4 240 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 HDDC3Q8N4P3 179 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 ALLCQ8N6M5 410 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 FRMD1Q8N878 549 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 KIAA1958Q8N8K9 716 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 IL17RCQ8NAC3 791 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 TXNDC5Q8NBS9 432 aaKnown RBP16.06■□□□□ 0.16
SEC13-206ENST00000397102 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 LRRC15Q8TF66 581 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 FUBP3Q96I24 572 aaKnown RBP eCLIP16.06■□□□□ 0.16
SEC13-206ENST00000397102 BCCIPQ9P287 314 aaKnown RBP eCLIP16.06■□□□□ 0.16
SEC13-206ENST00000397102 MBD1Q9UIS9 605 aaPredicted RBP16.06■□□□□ 0.16
SEC13-206ENST00000397102 GTF3C4Q9UKN8 822 aa16.06■□□□□ 0.16
SEC13-206ENST00000397102 GON4LQ3T8J9 2241 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 VWA3AA6NCI4 1184 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 MYMKA6NI61 221 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 TISP43B9A030 160 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 SGK1O00141 431 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 LEFTY2O00292 366 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 SLC26A4O43511 780 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 HUS1O60921 280 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms