RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 GREB1Q4ZG55 1949 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 PRR23AA6NEV1 266 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 SLC38A8A6NNN8 435 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 PSMA7O14818 248 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 SLC16A3O15427 465 aaKnown RBP14.86□□□□□ -0.03
SEC13-204ENST00000397099 AKAP3O75969 853 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 ASS1P00966 412 aaKnown RBP14.86□□□□□ -0.03
SEC13-204ENST00000397099 PDGFRBP09619 1106 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 GJA1P17302 382 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 GRIK1P39086 918 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 VIPR2P41587 438 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 PIK3CAP42336 1068 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 NOP14P78316 857 aaKnown RBP14.86□□□□□ -0.03
SEC13-204ENST00000397099 CYP27A1Q02318 531 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 GRM2Q14416 872 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 DDR2Q16832 855 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 DENND5BQ6ZUT9 1274 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 MON1AQ86VX9 555 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 SCN4BQ8IWT1 228 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 CMTM8Q8IZV2 173 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 B3GALNT2Q8NCR0 500 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 PLEKHO2Q8TD55 490 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 CSGALNACT1Q8TDX6 532 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 MYLPFQ96A32 169 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 PCED1BQ96HM7 432 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 C8orf48Q96LL4 319 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 MRPL45Q9BRJ2 306 aaKnown RBP14.86□□□□□ -0.03
SEC13-204ENST00000397099 BCO2Q9BYV7 579 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 PLA2G2FQ9BZM2 168 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 C8orf33Q9H7E9 229 aaPredicted RBP14.86□□□□□ -0.03
SEC13-204ENST00000397099 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 TMEM8AQ9HCN3 771 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 CRTAC1Q9NQ79 661 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 CHMP5Q9NZZ3 219 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 PCDHA5Q9Y5H7 936 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 OBSL1O75147 1896 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 MYO15AQ9UKN7 3530 aa14.86□□□□□ -0.03
SEC13-204ENST00000397099 FAM170BA6NMN3 283 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 VNN1O95497 513 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 CD72P21854 359 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
SEC13-204ENST00000397099 PRCPP42785 496 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 RPS9P46781 194 aaKnown RBP14.85□□□□□ -0.03
SEC13-204ENST00000397099 PSMC1P62191 440 aaKnown RBP14.85□□□□□ -0.03
SEC13-204ENST00000397099 DLG4P78352 724 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 KRT39Q6A163 491 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 SCARA3Q6AZY7 606 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 POTEHQ6S545 545 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 TPRG1Q6ZUI0 275 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 KIAA1958Q8N8K9 716 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 BPIFB1Q8TDL5 484 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 DHTKD1Q96HY7 919 aaPredicted RBP14.85□□□□□ -0.03
SEC13-204ENST00000397099 LTB4R2Q9NPC1 389 aa14.85□□□□□ -0.03
SEC13-204ENST00000397099 MAGED2Q9UNF1 606 aaPredicted RBP14.85□□□□□ -0.03
SEC13-204ENST00000397099 TICRRQ7Z2Z1 1910 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 TRAV19A0A0A6YYK7 116 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 ATP2C2O75185 946 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 LRRN2O75325 713 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 RTN3O95197 1032 aaPredicted RBP14.84□□□□□ -0.03
SEC13-204ENST00000397099 HLA-DRAP01903 254 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 BDNFP23560 247 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 AMPD2Q01433 879 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 MDH1BQ5I0G3 518 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 C1orf210Q8IVY1 113 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 ZC3H3Q8IXZ2 948 aaKnown RBP14.84□□□□□ -0.03
SEC13-204ENST00000397099 ADSSL1Q8N142 457 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 EXOC4Q96A65 974 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 TTLL2Q9BWV7 592 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 SLC46A2Q9BY10 475 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 METTL14Q9HCE5 456 aaKnown RBP14.84□□□□□ -0.03
SEC13-204ENST00000397099 HEBP1Q9NRV9 189 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 TDP1Q9NUW8 608 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 SPATA6Q9NWH7 488 aaPredicted RBP14.84□□□□□ -0.03
SEC13-204ENST00000397099 COMMD8Q9NX08 183 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 TRPM5Q9NZQ8 1165 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 ZFHX2Q9C0A1 2572 aaPredicted RBP14.84□□□□□ -0.03
SEC13-204ENST00000397099 FRYLO94915 3013 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 F5P12259 2224 aa14.84□□□□□ -0.03
SEC13-204ENST00000397099 BICDL2A1A5D9 508 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 ARNTLO00327 626 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 NRG2O14511 850 aaPredicted RBP14.83□□□□□ -0.04
SEC13-204ENST00000397099 USP17L7P0C7H9 530 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 CDR1P51861 262 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 UBE2HP62256 183 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 CYP4F8P98187 520 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 C1orf220Q5T0J3 134 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 STXBP5Q5T5C0 1151 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 TMEM150AQ86TG1 271 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 RALGPS2Q86X27 583 aaPredicted RBP14.83□□□□□ -0.04
SEC13-204ENST00000397099 CRYBG2Q8N1P7 616 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 MAB21L3Q8N8X9 362 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 PDZD8Q8NEN9 1154 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 OVCA2Q8WZ82 227 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 CLDN23Q96B33 292 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 SMARCD1Q96GM5 515 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 SLITRK1Q96PX8 696 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 SEMA4AQ9H3S1 761 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 SMYD3Q9H7B4 428 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 DLGAP2Q9P1A6 1054 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 MTF2Q9Y483 593 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms