RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 ZMYM5Q9UJ78 669 aa20.15■□□□□ 0.82
MCF2L-207ENST00000397024 HPSEQ9Y251 543 aa20.15■□□□□ 0.82
MCF2L-207ENST00000397024 GREB1Q4ZG55 1949 aa20.15■□□□□ 0.82
MCF2L-207ENST00000397024 ANAPC1Q9H1A4 1944 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 SOBPA7XYQ1 873 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 EXOC3O60645 756 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 TACC1O75410 805 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 HOXC13P31276 330 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 GNL1P36915 607 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-207ENST00000397024 USP46P62068 366 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 ITPRIPL2Q3MIP1 535 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 WDR72Q3MJ13 1102 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 C4orf50Q6ZRC1 276 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 MYCBPAPQ8TBZ2 947 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 PCED1BQ96HM7 432 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 EBF3Q9H4W6 596 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 UXTQ9UBK9 157 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-207ENST00000397024 CEP250Q9BV73 2442 aa20.14■□□□□ 0.81
MCF2L-207ENST00000397024 C2orf78A6NCI8 922 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 ARSAP15289 507 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 CXCL12P48061 93 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 CYP27A1Q02318 531 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 RUNX3Q13761 415 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 MDH1BQ5I0G3 518 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 KIAA2013Q8IYS2 634 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 OR6B3Q8NGW1 331 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 PARD3BQ8TEW8 1205 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 RUBCNQ92622 972 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 SPATA32Q96LK8 384 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 SNX25Q9H3E2 840 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 KCTD10Q9H3F6 313 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 DPEP3Q9H4B8 488 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 TRPC7Q9HCX4 862 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 EXOC1Q9NV70 894 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 TMEM30AQ9NV96 361 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 PTPRDP23468 1912 aa20.13■□□□□ 0.81
MCF2L-207ENST00000397024 LRRIQ3A6PVS8 624 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-207ENST00000397024 FAM163BP0C2L3 166 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 PTPN1P18031 435 aaKnown RBP20.12■□□□□ 0.81
MCF2L-207ENST00000397024 GRIK1P39086 918 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 CACNA2D1P54289 1103 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 CDH8P55286 799 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 DMWDQ09019 674 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 TRPC3Q13507 836 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 CCINQ13939 588 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 LRRC32Q14392 662 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 ZNF268Q14587 947 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-207ENST00000397024 TDRD10Q5VZ19 366 aaKnown RBP20.12■□□□□ 0.81
MCF2L-207ENST00000397024 C1orf228Q6PIY5 440 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 VSTM1Q6UX27 236 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 SPEM1Q8N4L4 309 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 ARL14EPQ8N8R7 260 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-207ENST00000397024 SPATA17Q96L03 361 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 IER2Q9BTL4 223 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 FAM126AQ9BYI3 521 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-207ENST00000397024 GCNT4Q9P109 453 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 NXF1Q9UBU9 619 aaKnown RBP20.12■□□□□ 0.81
MCF2L-207ENST00000397024 DNAH14Q0VDD8 3507 aa20.12■□□□□ 0.81
MCF2L-207ENST00000397024 ATG2BQ96BY7 2078 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 VNN1O95497 513 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 STAU1O95793 577 aaKnown RBP20.11■□□□□ 0.81
MCF2L-207ENST00000397024 C4BPAP04003 597 aaKnown RBP20.11■□□□□ 0.81
MCF2L-207ENST00000397024 PRR29P0C7W0 189 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 CCR3P51677 355 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 NDUFA8P51970 172 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 DLG4P78352 724 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 CLDN10P78369 228 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 PSMD2Q13200 908 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 MAPRE1Q15691 268 aaKnown RBP20.11■□□□□ 0.81
MCF2L-207ENST00000397024 DGKKQ5KSL6 1271 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 GOLGA5Q8TBA6 731 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 HINFPQ9BQA5 517 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 B3GNT5Q9BYG0 378 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 EPC1Q9H2F5 836 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 KIF9Q9HAQ2 790 aa20.11■□□□□ 0.81
MCF2L-207ENST00000397024 FBRSL1Q9HCM7 1045 aaKnown RBP20.11■□□□□ 0.81
MCF2L-207ENST00000397024 FAM237AA0A1B0GTK4 181 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 F8VP50 259 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 K7ESF4 209 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 CLDN5O00501 218 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 PHACTR2O75167 634 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 USP17L7P0C7H9 530 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 TNNC1P63316 161 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 KRT85P78386 507 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 ZXDBP98169 803 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 ZNF77Q15935 545 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 NAIF1Q69YI7 327 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-207ENST00000397024 PKN3Q6P5Z2 889 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 SLC9A9Q8IVB4 645 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 TTC16Q8NEE8 873 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 TMEM174Q8WUU8 243 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 SDCBP2Q9H190 292 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 SMYD3Q9H7B4 428 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 USP25Q9UHP3 1055 aa20.1■□□□□ 0.81
MCF2L-207ENST00000397024 SMG5Q9UPR3 1016 aaKnown RBP20.1■□□□□ 0.81
MCF2L-207ENST00000397024 TRAV19A0A0A6YYK7 116 aa20.09■□□□□ 0.81
MCF2L-207ENST00000397024 PDXKO00764 312 aa20.09■□□□□ 0.81
MCF2L-207ENST00000397024 RPN1P04843 607 aaKnown RBP20.09■□□□□ 0.81
MCF2L-207ENST00000397024 CKMP06732 381 aa20.09■□□□□ 0.81
MCF2L-207ENST00000397024 HDCP19113 662 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms