RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SEPT9Q9UHD8 586 aaPredicted RBP14.61□□□□□ -0.07
NUP98-204ENST00000397004 ALDH3A1P30838 453 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 PTPN7P35236 360 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 PCK1P35558 622 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 LIG4P49917 911 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 BPIFB4P59827 614 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 KRT76Q01546 638 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 FAAP100Q0VG06 881 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 ZC3H12AQ5D1E8 599 aaKnown RBP14.61□□□□□ -0.07
NUP98-204ENST00000397004 PYROXD1Q8WU10 500 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SCG3Q8WXD2 468 aaKnown RBP14.61□□□□□ -0.07
NUP98-204ENST00000397004 FAM111AQ96PZ2 611 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 FNBP1Q96RU3 617 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SCINQ9Y6U3 715 aa14.61□□□□□ -0.07
NUP98-204ENST00000397004 SFNP31947 248 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 ARL4CP56559 192 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 EMC1Q8N766 993 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 CLPTM1LQ96KA5 538 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 CHMP2BQ9UQN3 213 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 CST8O60676 142 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 TOP3BO95985 862 aaKnown RBP14.6□□□□□ -0.07
NUP98-204ENST00000397004 KBTBD12Q3ZCT8 623 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 MTERF2Q49AM1 385 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 TMEM154Q6P9G4 183 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 NPNTQ6UXI9 565 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 A0A0B4J269 797 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 TCRBV9S1A1TA0A576 114 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 CXorf49A8MYA2 514 aaPredicted RBP14.6□□□□□ -0.07
NUP98-204ENST00000397004 WEE2P0C1S8 567 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 IRX1P78414 480 aaPredicted RBP14.6□□□□□ -0.07
NUP98-204ENST00000397004 LMNB2Q03252 620 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 PTPN20Q4JDL3 420 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 SH3PXD2AQ5TCZ1 1133 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 LRRC38Q5VT99 294 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 GPAT2Q6NUI2 795 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 ATG14Q6ZNE5 492 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 FAM71DQ8N9W8 422 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 VPS11Q9H270 941 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 SIP14410 1827 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 TBC1D12O60347 775 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 UGT1A9O60656 530 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 EGFRP00533 1210 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 YY1P25490 414 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 MYL6P60660 151 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 MCL1Q07820 350 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 NCOA4Q13772 614 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 DLGAP5Q15398 846 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 GNPTABQ3T906 1256 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 ABHD15Q6UXT9 468 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 TRIM72Q6ZMU5 477 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 TEX9Q8N6V9 391 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 PDGFDQ9GZP0 370 aaPredicted RBP14.6□□□□□ -0.07
NUP98-204ENST00000397004 C17orf75Q9HAS0 396 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 UGT1A7Q9HAW7 530 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 UGT1A10Q9HAW8 530 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 UGT1A8Q9HAW9 530 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 DLGAP2Q9P1A6 1054 aa14.6□□□□□ -0.07
NUP98-204ENST00000397004 CYB561D2O14569 222 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 CAPN9O14815 690 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 RARBP10826 455 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 PYGBP11216 843 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 ELK3P41970 407 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 ORC1Q13415 861 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 TAZQ16635 292 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 BBS9Q3SYG4 887 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 ARHGEF16Q5VV41 709 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 DENND1BQ6P3S1 775 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 PPIL6Q8IXY8 311 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 SH3TC2Q8TF17 1288 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 ANKRD27Q96NW4 1050 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 NVLO15381 856 aaKnown RBP14.59□□□□□ -0.07
NUP98-204ENST00000397004 DNAJC6O75061 913 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 DGAT1O75907 488 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 LUC7L3O95232 432 aaKnown RBP14.59□□□□□ -0.07
NUP98-204ENST00000397004 NR3C2P08235 984 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 GCLCP48506 637 aaPredicted RBP14.59□□□□□ -0.07
NUP98-204ENST00000397004 MAP3K10Q02779 954 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 MMRN1Q13201 1228 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 RSBN1LQ6PCB5 846 aaPredicted RBP14.59□□□□□ -0.07
NUP98-204ENST00000397004 MCF2L2Q86YR7 1114 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.59□□□□□ -0.07
NUP98-204ENST00000397004 FBXO41Q8TF61 875 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 TSSK1BQ9BXA7 367 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 SMYD2Q9NRG4 433 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 PARP14Q460N5 1801 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 CAPN14A8MX76 684 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 MYL2P10916 166 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 HARSP12081 509 aaKnown RBP14.59□□□□□ -0.07
NUP98-204ENST00000397004 MRPS5P82675 430 aaKnown RBP14.59□□□□□ -0.07
NUP98-204ENST00000397004 CDK16Q00536 496 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 ENPEPQ07075 957 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 ZNF398Q8TD17 642 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 GINM1Q9NU53 330 aa14.59□□□□□ -0.07
NUP98-204ENST00000397004 PSMG1O95456 288 aa14.58□□□□□ -0.08
NUP98-204ENST00000397004 ASS1P00966 412 aaKnown RBP14.58□□□□□ -0.08
NUP98-204ENST00000397004 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
NUP98-204ENST00000397004 CYP4V2Q6ZWL3 525 aaPredicted RBP14.58□□□□□ -0.08
NUP98-204ENST00000397004 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.08
NUP98-204ENST00000397004 NSL1Q96IY1 281 aa14.58□□□□□ -0.08
NUP98-204ENST00000397004 MTMR12Q9C0I1 747 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms