RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DPP6P42658 865 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 GPR15P49685 360 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 CDR1P51861 262 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 SURF1Q15526 300 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 PMS2CLQ68D20 193 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 PSAPL1Q6NUJ1 521 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 FAM171BQ6P995 826 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 SV2BQ7L1I2 683 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 ADGRF2Q8IZF7 708 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 RIN3Q8TB24 985 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 SH3RF2Q8TEC5 729 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 CYP2S1Q96SQ9 504 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 WNT6Q9Y6F9 365 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 SCN1AP35498 2009 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 KIF26AQ9ULI4 1882 aaPredicted RBP18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 CSRP1P21291 193 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 NOVA1P51513 510 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 MRPS21P82921 87 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 SF3A1Q15459 793 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 SDHAF4Q5VUM1 108 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 DYMQ7RTS9 669 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 RASSF3Q86WH2 238 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 SCN4BQ8IWT1 228 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 SYCP3Q8IZU3 236 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 USP33Q8TEY7 942 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 CNOT6LQ96LI5 555 aaKnown RBP18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 SMOC1Q9H4F8 434 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 TMEM9BQ9NQ34 198 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 TRPM5Q9NZQ8 1165 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 MAGEC2Q9UBF1 373 aaPredicted RBP18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 CDH9Q9ULB4 789 aa18.75■□□□□ 0.59
EXOSC3-202ENST00000396521 TSC2P49815 1807 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 FAM208BQ5VWN6 2430 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 CACNA1GO43497 2377 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 LNP1A1A4G5 178 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 MYMKA6NI61 221 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 C4orf47A7E2U8 309 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 GCNT3O95395 438 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 TMEM191BP0C7N4 346 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 EIF2DP41214 584 aaKnown RBP18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 BYSLQ13895 437 aaKnown RBP18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 SPDYCQ5MJ68 293 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 RRAGBQ5VZM2 374 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 LMBRD2Q68DH5 695 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 ARL14EPQ8N8R7 260 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 CXorf38Q8TB03 319 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 EZH1Q92800 747 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 ANKRD36BP1Q96IX9 119 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 SLC22A12Q96S37 553 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 MMP17Q9ULZ9 603 aa18.74■□□□□ 0.59
EXOSC3-202ENST00000396521 TMEM8BA6NDV4 472 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 DCLK1O15075 740 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 KRT19P08727 400 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 FAM163BP0C2L3 166 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 ACAT1P24752 427 aaKnown RBP18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 ANXA13P27216 316 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 LMAN2Q12907 356 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 SOWAHAQ2M3V2 549 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 TCEAL6Q6IPX3 200 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 DENND5BQ6ZUT9 1274 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 STXBP4Q6ZWJ1 553 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 CYP2U1Q7Z449 544 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 LIMS2Q7Z4I7 341 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 TCEAL3Q969E4 200 aa18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 EVLQ9UI08 416 aaPredicted RBP18.73■□□□□ 0.59
EXOSC3-202ENST00000396521 TRIM66O15016 1216 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 GRIK1P39086 918 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 SLC7A9P82251 487 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 GRIN1Q05586 938 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 CRY1Q16526 586 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 DUOXA2Q1HG44 320 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 PREPLQ4J6C6 727 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 CCDC73Q6ZRK6 1079 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 DDX42Q86XP3 938 aaKnown RBP eCLIP18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 KDF1Q8NAX2 398 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 TTC16Q8NEE8 873 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 DNAJC19Q96DA6 116 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 SAAL1Q96ER3 474 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 HPDLQ96IR7 371 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 EPSTI1Q96J88 318 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 SPACA7Q96KW9 195 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 TTLL2Q9BWV7 592 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 LINC00597Q9H2U6 94 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 KIAA1586Q9HCI6 787 aa18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 SRPRBQ9Y5M8 271 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-202ENST00000396521 LAMA1P25391 3075 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 C2orf78A6NCI8 922 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 K7EQS6 105 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 TNNC2P02585 160 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 PDCP20941 246 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 OPRD1P41143 372 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 NOP14P78316 857 aaKnown RBP18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 KCNA1Q09470 495 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 ZNF252P-AS1Q0IIN9 211 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 C2orf27AQ580R0 203 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 SH3PXD2AQ5TCZ1 1133 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 NAIF1Q69YI7 327 aaPredicted RBP18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 ANO7Q6IWH7 933 aa18.71■□□□□ 0.59
EXOSC3-202ENST00000396521 UNQ6494/PRO21346Q6UXR6 183 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms