RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 RASSF2P50749 326 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 TAB3Q8N5C8 712 aaPredicted RBP16.47■□□□□ 0.23
HOXA3-202ENST00000396352 PCYT2Q99447 389 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 KLF6Q99612 283 aaPredicted RBP16.47■□□□□ 0.23
HOXA3-202ENST00000396352 MIPEPQ99797 713 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 VPS33BQ9H267 617 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 ACAD9Q9H845 621 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 SAR1AQ9NR31 198 aa16.47■□□□□ 0.23
HOXA3-202ENST00000396352 SIGLEC16A6NMB1 481 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 E7ENQ6 273 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 OVGP1Q12889 678 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 SGSM1Q2NKQ1 1148 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 TTC13Q8NBP0 860 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 XYLT2Q9H1B5 865 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 VPS11Q9H270 941 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 DENND2DQ9H6A0 471 aaPredicted RBP16.46■□□□□ 0.23
HOXA3-202ENST00000396352 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 LRRC42Q9Y546 428 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 SMNDC1O75940 238 aaKnown RBP eCLIP16.46■□□□□ 0.23
HOXA3-202ENST00000396352 KRT7P08729 469 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 KRT3P12035 628 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 ICAM3P32942 547 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 RFC5P40937 340 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 HMGCS2P54868 508 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 WASHC2DQ5SRD0 308 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 TTC8Q8TAM2 541 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 XPO7Q9UIA9 1087 aaKnown RBP16.46■□□□□ 0.23
HOXA3-202ENST00000396352 DCTN4Q9UJW0 460 aa16.46■□□□□ 0.23
HOXA3-202ENST00000396352 TAF11Q15544 211 aa16.46■□□□□ 0.22
HOXA3-202ENST00000396352 IGDCC3Q8IVU1 814 aa16.46■□□□□ 0.22
HOXA3-202ENST00000396352 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.22
HOXA3-202ENST00000396352 RSAD2Q8WXG1 361 aa16.46■□□□□ 0.22
HOXA3-202ENST00000396352 NAF1Q96HR8 494 aaKnown RBP16.46■□□□□ 0.22
HOXA3-202ENST00000396352 NUDCD1Q96RS6 583 aa16.46■□□□□ 0.22
HOXA3-202ENST00000396352 TEX13BQ9BXU2 312 aa16.46■□□□□ 0.22
HOXA3-202ENST00000396352 MANSC1Q9H8J5 431 aa16.46■□□□□ 0.22
HOXA3-202ENST00000396352 ABLIM1O14639 778 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 TOM1L1O75674 476 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 TROVE2P10155 538 aaKnown RBP eCLIP16.45■□□□□ 0.22
HOXA3-202ENST00000396352 NRLP54845 237 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 BLMHQ13867 455 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 NBPF12Q5TAG4 269 aaPredicted RBP16.45■□□□□ 0.22
HOXA3-202ENST00000396352 CIAPIN1Q6FI81 312 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 THNSL1Q8IYQ7 743 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 FNIP1Q8TF40 1166 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 ALKBH8Q96BT7 664 aaKnown RBP16.45■□□□□ 0.22
HOXA3-202ENST00000396352 TRIM6Q9C030 488 aaPredicted RBP16.45■□□□□ 0.22
HOXA3-202ENST00000396352 LIN7AO14910 233 aaPredicted RBP16.45■□□□□ 0.22
HOXA3-202ENST00000396352 ENTPD5O75356 428 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 DHRS4L1P0CG22 281 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 RAD23BP54727 409 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 DUOXA2Q1HG44 320 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 BBS9Q3SYG4 887 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 SCYL3Q8IZE3 742 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 FAM71DQ8N9W8 422 aa16.45■□□□□ 0.22
HOXA3-202ENST00000396352 SKAP2O75563 359 aaPredicted RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 HOXC6P09630 235 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 PTPRAP18433 802 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 ETV4P43268 484 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 TAF5Q15542 800 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 ZNF699Q32M78 642 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 PALM2Q8IXS6 379 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 EMC1Q8N766 993 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 PRPF31Q8WWY3 499 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 PTCD3Q96EY7 689 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 C12orf42Q96LP6 360 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 KCNK13Q9HB14 408 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 CPSF3Q9UKF6 684 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 RPL26L1Q9UNX3 145 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 NEK3P51956 506 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 ZNF280AP59817 542 aaPredicted RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 SEPT7Q16181 437 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 SH2D5Q6ZV89 423 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 SERAC1Q96JX3 654 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 CPXM1Q96SM3 734 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 ACO2Q99798 780 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 LHX5Q9H2C1 402 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 CHMP2BQ9UQN3 213 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 APOC4-APOC2K7ER74 178 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 HNRNPCL1O60812 293 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 APOC2P02655 101 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 TSHRP16473 764 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 HIRAP54198 1017 aaPredicted RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 YWHAEP62258 255 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 STXBP2Q15833 593 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 HADHQ16836 314 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 RFWD3Q6PCD5 774 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 LRRC6Q86X45 466 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 XYLT1Q86Y38 959 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 PDIK1LQ8N165 341 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 MRPL4Q9BYD3 311 aaKnown RBP16.44■□□□□ 0.22
HOXA3-202ENST00000396352 POLIQ9UNA4 740 aa16.44■□□□□ 0.22
HOXA3-202ENST00000396352 OGTO15294 1046 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 DPEP1P16444 411 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 MARK3P27448 753 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 TRPC3Q13507 836 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 TCHPQ9BT92 498 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms