RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PSMG2Q969U7 264 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 SMARCD1Q96GM5 515 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 NAP1L5Q96NT1 182 aaPredicted RBP20.38■□□□□ 0.85
HOXA9-202ENST00000396345 ERGIC2Q96RQ1 377 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 CORO1BQ9BR76 489 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 POMKQ9H5K3 350 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 WDR6Q9NNW5 1121 aaKnown RBP20.38■□□□□ 0.85
HOXA9-202ENST00000396345 AJAP1Q9UKB5 411 aaPredicted RBP20.38■□□□□ 0.85
HOXA9-202ENST00000396345 KIAA1257Q9ULG3 409 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 CNTN6Q9UQ52 1028 aa20.38■□□□□ 0.85
HOXA9-202ENST00000396345 DOCK6Q96HP0 2047 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 CLUHO75153 1309 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 A0A1B0GTH6 734 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 RNF225M0QZC1 329 aaPredicted RBP20.37■□□□□ 0.85
HOXA9-202ENST00000396345 AP1G2O75843 785 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 VDRP11473 427 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 BMP1P13497 986 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 UCHL3P15374 230 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 CD19P15391 556 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 RFX1P22670 979 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 CACNA2D1P54289 1103 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 TAF12Q16514 161 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 PABPC1LQ4VXU2 614 aaKnown RBP20.37■□□□□ 0.85
HOXA9-202ENST00000396345 SGO2Q562F6 1265 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 PPP1R26Q5T8A7 1209 aaPredicted RBP20.37■□□□□ 0.85
HOXA9-202ENST00000396345 DNAJB7Q7Z6W7 309 aaPredicted RBP20.37■□□□□ 0.85
HOXA9-202ENST00000396345 C8orf48Q96LL4 319 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 KRT82Q9NSB4 513 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 FAM207AQ9NSI2 230 aaPredicted RBP20.37■□□□□ 0.85
HOXA9-202ENST00000396345 FHOD1Q9Y613 1164 aa20.37■□□□□ 0.85
HOXA9-202ENST00000396345 F8VP50 259 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 RHOP08100 348 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 FAM200BP0CF97 657 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 USP8P40818 1118 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 ZNF132P52740 706 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 RAPGEF1Q13905 1077 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 ARHGAP17Q68EM7 881 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 SMYD5Q6GMV2 418 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 HS6ST3Q8IZP7 471 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 NEK11Q8NG66 645 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 SHC3Q92529 594 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 SPATA17Q96L03 361 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 PHF7Q9BWX1 381 aaPredicted RBP20.36■□□□□ 0.85
HOXA9-202ENST00000396345 NAA15Q9BXJ9 866 aaKnown RBP20.36■□□□□ 0.85
HOXA9-202ENST00000396345 GANQ9H2C0 597 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 ASAH2Q9NR71 780 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 TMEM30AQ9NV96 361 aa20.36■□□□□ 0.85
HOXA9-202ENST00000396345 MYH10P35580 1976 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 SLC38A8A6NNN8 435 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 NOL4O94818 638 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 CSH1P0DML2 217 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 CSH2P0DML3 217 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 FSHRP23945 695 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 UBASH3AP57075 661 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 DRAP1Q14919 205 aaPredicted RBP20.35■□□□□ 0.85
HOXA9-202ENST00000396345 NR1I3Q14994 352 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 CYP4A22Q5TCH4 519 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 LEMD2Q8NC56 503 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 STKLD1Q8NE28 680 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 CEP295NLQ96MC4 621 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 KCNK16Q96T55 309 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 SMOQ99835 787 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 ANP32EQ9BTT0 268 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 DMAP1Q9NPF5 467 aaPredicted RBP20.35■□□□□ 0.85
HOXA9-202ENST00000396345 AVENQ9NQS1 362 aaPredicted RBP20.35■□□□□ 0.85
HOXA9-202ENST00000396345 DAAM1Q9Y4D1 1078 aa20.35■□□□□ 0.85
HOXA9-202ENST00000396345 NOTCH4Q99466 2003 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 TCF20Q9UGU0 1960 aaKnown RBP20.34■□□□□ 0.85
HOXA9-202ENST00000396345 FOXN3O00409 490 aaPredicted RBP20.34■□□□□ 0.85
HOXA9-202ENST00000396345 ZNF197O14709 1029 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 MYL4P12829 197 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 EPHA5P54756 1037 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 MAP3K7CLP57077 242 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 POLR2FP61218 127 aaKnown RBP20.34■□□□□ 0.85
HOXA9-202ENST00000396345 MTMR3Q13615 1198 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 TJAP1Q5JTD0 557 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 PDZD4Q76G19 769 aaPredicted RBP20.34■□□□□ 0.85
HOXA9-202ENST00000396345 TMC8Q8IU68 726 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 TFAP2BQ92481 460 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 LRRC3Q9BY71 257 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 DUSP16Q9BY84 665 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 STK33Q9BYT3 514 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 CSNK1G1Q9HCP0 422 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 MAGED2Q9UNF1 606 aaPredicted RBP20.34■□□□□ 0.85
HOXA9-202ENST00000396345 MRPS23Q9Y3D9 190 aaKnown RBP20.34■□□□□ 0.85
HOXA9-202ENST00000396345 DENND4AQ7Z401 1863 aa20.34■□□□□ 0.85
HOXA9-202ENST00000396345 CUL9Q8IWT3 2517 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 EPHB6O15197 1021 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 BEST1O76090 585 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 CALCAP01258 141 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 HMGA1P17096 107 aaKnown RBP20.33■□□□□ 0.85
HOXA9-202ENST00000396345 BRD2P25440 801 aaKnown RBP20.33■□□□□ 0.85
HOXA9-202ENST00000396345 PTPN21Q16825 1174 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 GOLGA7BQ2TAP0 167 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 CLEC20AQ6ZU45 233 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 DENND5BQ6ZUT9 1274 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 GET4Q7L5D6 327 aaPredicted RBP20.33■□□□□ 0.85
HOXA9-202ENST00000396345 ZMIZ2Q8NF64 920 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 ITFG1Q8TB96 612 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 ZNF334Q9HCZ1 680 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms