RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MIS12Q9H081 205 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 RAB17Q9H0T7 212 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 R3HDMLQ9H3Y0 253 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 HOMER2Q9NSB8 354 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 C1orf112Q9NSG2 853 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 CHCHD3Q9NX63 227 aaKnown RBP5.65□□□□□ -1.5
VPS41-203ENST00000395969 CTNNAL1Q9UBT7 734 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 FETUBQ9UGM5 382 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 SIX4Q9UIU6 781 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 COG5Q9UP83 839 aa5.65□□□□□ -1.5
VPS41-203ENST00000395969 A8MUI8 341 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TMEM189-UBE2V1I3L0A0 370 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 HNRNPDLO14979 420 aaKnown RBP5.65□□□□□ -1.51
VPS41-203ENST00000395969 SMIM24O75264 130 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 PPFIA2O75334 1257 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 PALMO75781 387 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 UBOX5O94941 541 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 EFEMP2O95967 443 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 CALB1P05937 261 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 MMEP08473 750 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 DARSP14868 501 aaKnown RBP5.65□□□□□ -1.51
VPS41-203ENST00000395969 CHN1P15882 459 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TSHRP16473 764 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 PNPLA4P41247 253 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TUBP50607 506 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 ARSEP51690 589 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 WNT7BP56706 349 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TBX4P57082 545 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 RAPGEF1Q13905 1077 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TAF11Q15544 211 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TRIM71Q2Q1W2 868 aaKnown RBP5.65□□□□□ -1.51
VPS41-203ENST00000395969 FAM133BQ5BKY9 247 aaKnown RBP5.65□□□□□ -1.51
VPS41-203ENST00000395969 DCAF12L1Q5VU92 463 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 C1orf53Q5VUE5 145 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 PRAMEF18Q5VWM3 479 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 RINLQ6ZS11 566 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 LRRC34Q8IZ02 419 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 CRYBG2Q8N1P7 616 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 GBP7Q8N8V2 638 aaPredicted RBP5.65□□□□□ -1.51
VPS41-203ENST00000395969 B4GALNT2Q8NHY0 566 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 SLC35G2Q8TBE7 412 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 FAM81AQ8TBF8 368 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TEKT4Q8WW24 435 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 POMGNT1Q8WZA1 660 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 MCRS1Q96EZ8 462 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 PGM2Q96G03 612 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 MS4A3Q96HJ5 214 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 RBM41Q96IZ5 413 aaKnown RBP5.65□□□□□ -1.51
VPS41-203ENST00000395969 ECT2Q9H8V3 914 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 RNF19AQ9NV58 838 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 STRIP2Q9ULQ0 834 aa5.65□□□□□ -1.51
VPS41-203ENST00000395969 TDRD15B5MCY1 1934 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 EVPLQ92817 2033 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 LRRD1A4D1F6 860 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 CLDN3O15551 220 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 BUB1O43683 1085 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 SNX3O60493 162 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 ADAMTS4O75173 837 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 CILPO75339 1184 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 NUDT17P0C025 328 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 IQCF3P0C7M6 154 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 CCNB1P14635 433 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 ATP6V1C1P21283 382 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 SKIV2L2P42285 1042 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 PTGIRP43119 386 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 MAGEA6P43360 314 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 MAGEA8P43361 318 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 PDE6CP51160 858 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 CYP2J2P51589 502 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 PURAQ00577 322 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 GRIK4Q16099 956 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 HHATQ5VTY9 493 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 MYLK4Q86YV6 388 aaPredicted RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 RBM12BQ8IXT5 1001 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 CENPIQ92674 756 aaPredicted RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 FAF2Q96CS3 445 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 MSTO1Q9BUK6 570 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 RNPEPQ9H4A4 650 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 RMI1Q9H9A7 625 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 PIDD1Q9HB75 910 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 MRPL47Q9HD33 250 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 UBE2TQ9NPD8 197 aaPredicted RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 SAMD15Q9P1V8 674 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 ADAMTS1Q9UHI8 967 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 DRG1Q9Y295 367 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 GREB1Q4ZG55 1949 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 TMEM191CA6NGB0 347 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 H3BRB1 525 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 PGRMC1O00264 195 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 THAP12O43422 761 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 MED7O43513 233 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 PROSCO94903 275 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 CYP11A1P05108 521 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 TMEM191BP0C7N4 346 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 TRIM49P0CI25 452 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 TRIM49CP0CI26 452 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 INSRRP14616 1297 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 WARSP23381 471 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 BDNFP23560 247 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 PCK1P35558 622 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms