RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 RTP3Q9BQQ7 232 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 ZCWPW1Q9H0M4 648 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 HCSTQ9UBK5 93 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 BACE2Q9Y5Z0 518 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 DUSP10Q9Y6W6 482 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 COL4A6Q14031 1691 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 HCRTO43612 131 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 ATP2C2O75185 946 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 MTA2O94776 668 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 SSTR3P32745 418 aaPredicted RBP14.45□□□□□ -0.1
VAPB-202ENST00000395802 GABRB2P47870 512 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 CFAP221Q4G0U5 840 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 TMEM110Q86TL2 294 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 TTC30AQ86WT1 665 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 RNF168Q8IYW5 571 aaPredicted RBP14.45□□□□□ -0.1
VAPB-202ENST00000395802 OR10T2Q8NGX3 314 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 PIK3R5Q8WYR1 880 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 RNPC3Q96LT9 517 aaKnown RBP14.45□□□□□ -0.1
VAPB-202ENST00000395802 PLVAPQ9BX97 442 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 PNPLA8Q9NP80 782 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 CHST7Q9NS84 486 aa14.45□□□□□ -0.1
VAPB-202ENST00000395802 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
VAPB-202ENST00000395802 EFEMP2O95967 443 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 URODP06132 367 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 DESP17661 470 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 RRM1P23921 792 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 MAGEA10P43363 369 aaPredicted RBP14.44□□□□□ -0.1
VAPB-202ENST00000395802 GLUD2P49448 558 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 PDE4CQ08493 712 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 KIAA0319Q5VV43 1072 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 DNAJC24Q6P3W2 148 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 VSTM1Q6UX27 236 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 FAM35AQ86V20 835 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 TMEM173Q86WV6 379 aaPredicted RBP14.44□□□□□ -0.1
VAPB-202ENST00000395802 C3orf20Q8ND61 904 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 ZNF564Q8TBZ8 553 aaPredicted RBP14.44□□□□□ -0.1
VAPB-202ENST00000395802 KCTD13Q8WZ19 329 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 HERC2P3Q9BVR0 1158 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 NUP85Q9BW27 656 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 SLC4A5Q9BY07 1137 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 B3GNT5Q9BYG0 378 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 L2HGDHQ9H9P8 463 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 ABCB6Q9NP58 842 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.44□□□□□ -0.1
VAPB-202ENST00000395802 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 JRKLQ9Y4A0 524 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 PCDHGC5Q9Y5F6 944 aa14.44□□□□□ -0.1
VAPB-202ENST00000395802 MYO1FO00160 1098 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 BUB1O43683 1085 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 AP1G2O75843 785 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 CASQ1P31415 396 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 DSG1Q02413 1049 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 GPR17Q13304 367 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 PTPN20Q4JDL3 420 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 SLC39A12Q504Y0 691 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 RTP2Q5QGT7 225 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 PLEKHA7Q6IQ23 1121 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 DCUN1D2Q6PH85 259 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 CPXM1Q96SM3 734 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 PKMYT1Q99640 499 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 SELENOOQ9BVL4 669 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 LRRC4Q9HBW1 653 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 DMAP1Q9NPF5 467 aaPredicted RBP14.43□□□□□ -0.1
VAPB-202ENST00000395802 MRPL17Q9NRX2 175 aaKnown RBP14.43□□□□□ -0.1
VAPB-202ENST00000395802 PCDHB5Q9Y5E4 795 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 TSC2P49815 1807 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 CTAGE9A4FU28 777 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 SART1O43290 800 aaKnown RBP14.43□□□□□ -0.1
VAPB-202ENST00000395802 MOCS3O95396 460 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 CPB1P15086 417 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 RPL34P49207 117 aaKnown RBP14.43□□□□□ -0.1
VAPB-202ENST00000395802 PTP4A2Q12974 167 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 MAMLD1Q13495 774 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 PSMD5Q16401 504 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 SLC8B1Q6J4K2 584 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 PMF1Q6P1K2 205 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 CLEC20AQ6ZU45 233 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 DAAM2Q86T65 1068 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 SLC35F6Q8N357 371 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 MYRIPQ8NFW9 859 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 SPPL2BQ8TCT7 592 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 RIN2Q8WYP3 895 aaPredicted RBP14.43□□□□□ -0.1
VAPB-202ENST00000395802 SAMD11Q96NU1 681 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 CSNK1G1Q9HCP0 422 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 MTRRQ9UBK8 725 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 LZTS1Q9Y250 596 aa14.43□□□□□ -0.1
VAPB-202ENST00000395802 TRIM66O15016 1216 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 FGF18O76093 207 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 FBXO21O94952 628 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 RB1P06400 928 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 KRT3P12035 628 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 BMPR1AP36894 532 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 SCNN1AP37088 669 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 PAQR9Q6ZVX9 377 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 DNAAF5Q86Y56 855 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 SIX6OS1Q8N1H7 587 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 FBXO22Q8NEZ5 403 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 TPCN2Q8NHX9 752 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 BCL7CQ8WUZ0 217 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms