RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 ZNF638Q14966 1978 aaKnown RBP11.78□□□□□ -0.52
TOM1-202ENST00000395736 LRRIQ3A6PVS8 624 aaPredicted RBP11.78□□□□□ -0.52
TOM1-202ENST00000395736 EXOC3O60645 756 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
TOM1-202ENST00000395736 CSH1P0DML2 217 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CSH2P0DML3 217 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TDGF1P13385 188 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CCNE1P24864 410 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 MAGEA9P43362 315 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 MAGEA11P43364 429 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CACNA2D1P54289 1103 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 DLG4P78352 724 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CLDN10P78369 228 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TNK2Q07912 1038 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 MTAPQ13126 283 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 GAS6Q14393 721 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TDRD10Q5VZ19 366 aaKnown RBP11.78□□□□□ -0.52
TOM1-202ENST00000395736 TXNDC8Q6A555 127 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TSSK4Q6SA08 328 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 SPATA2LQ8IUW3 424 aaPredicted RBP11.78□□□□□ -0.52
TOM1-202ENST00000395736 SLC9A9Q8IVB4 645 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 YAF2Q8IY57 180 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CMTM8Q8IZV2 173 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 MAB21L3Q8N8X9 362 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TTC8Q8TAM2 541 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 BPIFB1Q8TDL5 484 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 PARD3BQ8TEW8 1205 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TMEM174Q8WUU8 243 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 FAM3CQ92520 227 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 USP13Q92995 863 aaPredicted RBP11.78□□□□□ -0.52
TOM1-202ENST00000395736 ELMO3Q96BJ8 720 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TRMT2BQ96GJ1 504 aaKnown RBP11.78□□□□□ -0.52
TOM1-202ENST00000395736 PCED1BQ96HM7 432 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 FUBP3Q96I24 572 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOM1-202ENST00000395736 MYRFLQ96LU7 910 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 GCNAQ96QF7 691 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 FNBP1Q96RU3 617 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 NELL2Q99435 816 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CHRDQ9H2X0 955 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 DPEP3Q9H4B8 488 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 TMEM30AQ9NV96 361 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 GTSE1Q9NYZ3 720 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 NCDNQ9UBB6 729 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 FBXO4Q9UKT5 387 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CDH9Q9ULB4 789 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 IGF2RP11717 2491 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 LAMA1P25391 3075 aa11.78□□□□□ -0.52
TOM1-202ENST00000395736 CNOT1A5YKK6 2376 aaKnown RBP11.77□□□□□ -0.52
TOM1-202ENST00000395736 PRR5-ARHGAP8B1AHC4 643 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 SPECC1L-ADORA2AF8WAN1 911 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 MAN2B1O00754 1011 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 LAMTOR5O43504 91 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 TACC1O75410 805 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 VNN1O95497 513 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 RPN1P04843 607 aaKnown RBP11.77□□□□□ -0.53
TOM1-202ENST00000395736 PDGFRBP09619 1106 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 CHRNB1P11230 501 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 CTHP32929 405 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 SYKP43405 635 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.53
TOM1-202ENST00000395736 MYL6P60660 151 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 USP46P62068 366 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 RPL10AP62906 217 aaKnown RBP11.77□□□□□ -0.53
TOM1-202ENST00000395736 ARHGAP8P85298 464 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 LMNB2Q03252 620 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 DPYDQ12882 1025 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 TAF12Q16514 161 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 ARHGAP29Q52LW3 1261 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 C1orf220Q5T0J3 134 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 GOLGA5Q8TBA6 731 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 CSGALNACT1Q8TDX6 532 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 NELL1Q92832 810 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 MMS19Q96T76 1030 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 HPS4Q9NQG7 708 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 USP25Q9UHP3 1055 aa11.77□□□□□ -0.53
TOM1-202ENST00000395736 MRPS17Q9Y2R5 130 aaKnown RBP11.77□□□□□ -0.53
TOM1-202ENST00000395736 KIAA1549LQ6ZVL6 1849 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 BPTFQ12830 3046 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 A0A1W2PQ27 194 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 A0A1W2PQ64 194 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 A0A1W2PQD8 194 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 OTOL1A6NHN0 477 aaPredicted RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 PDXKO00764 312 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 DPYSL4O14531 572 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 KINO60870 393 aaKnown RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 RHOBTB3O94955 611 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 ZIC2O95409 532 aaPredicted RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 C4BPAP04003 597 aaKnown RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 NR3C1P04150 777 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 MYL1P05976 194 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 BDNFP23560 247 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 DDX6P26196 483 aaKnown RBP eCLIP11.76□□□□□ -0.53
TOM1-202ENST00000395736 RAP1GAPP47736 663 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 CSTF1Q05048 431 aaKnown RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 PSMD2Q13200 908 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 ZNF528Q3MIS6 628 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms