RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SLC24A5Q71RS6 500 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
RTN1-203ENST00000395090 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 REXO1L1PQ8IX06 675 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 C17orf53Q8N3J3 647 aaPredicted RBP12.19□□□□□ -0.46
RTN1-203ENST00000395090 GOLGA6L1Q8N7Z2 621 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 UBR7Q8N806 425 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 PGBD4Q96DM1 585 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
RTN1-203ENST00000395090 APOL6Q9BWW8 343 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 OXCT2Q9BYC2 517 aaPredicted RBP12.19□□□□□ -0.46
RTN1-203ENST00000395090 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 HIPK3Q9H422 1215 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
RTN1-203ENST00000395090 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 GDF2Q9UK05 429 aaPredicted RBP12.19□□□□□ -0.46
RTN1-203ENST00000395090 SLC6A14Q9UN76 642 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 AGAP1Q9UPQ3 857 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 PPP2R2CQ9Y2T4 447 aa12.19□□□□□ -0.46
RTN1-203ENST00000395090 UMODL1Q5DID0 1318 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 PIRO00625 290 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 CCP110O43303 1012 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 ZSCAN12O43309 604 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 XPOTO43592 962 aaKnown RBP12.18□□□□□ -0.46
RTN1-203ENST00000395090 CCDC175P0C221 793 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 PNMA6AP0CW24 399 aaPredicted RBP12.18□□□□□ -0.46
RTN1-203ENST00000395090 ACPPP15309 386 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 LRPAP1P30533 357 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 POLR2BP30876 1174 aaKnown RBP12.18□□□□□ -0.46
RTN1-203ENST00000395090 NAB2Q15742 525 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 NECAB2Q7Z6G3 386 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 UBE2Q1Q7Z7E8 422 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 LRRC52Q8N7C0 313 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 OLIG1Q8TAK6 271 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
RTN1-203ENST00000395090 HPDLQ96IR7 371 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 GAD1Q99259 594 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 DZANK1Q9NVP4 752 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 REXO2Q9Y3B8 237 aaKnown RBP12.18□□□□□ -0.46
RTN1-203ENST00000395090 TRIP11Q15643 1979 aa12.18□□□□□ -0.46
RTN1-203ENST00000395090 RALGAPA2Q2PPJ7 1873 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 ARL5CA6NH57 179 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 USP27XA6NNY8 438 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 ENPP3O14638 875 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 ZNF263O14978 683 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 AKR1B10O60218 316 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 KRT19P08727 400 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 ASPAP45381 313 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 GUCY2FP51841 1108 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 KIF11P52732 1056 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 KRT83P78385 493 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 SLC18A3Q16572 532 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 LRRC26Q2I0M4 334 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 ZNF699Q32M78 642 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 WDR72Q3MJ13 1102 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 GLRA4Q5JXX5 417 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 C9orf57Q5W0N0 161 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 TMEM130Q8N3G9 435 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 DBF4BQ8NFT6 615 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 SLC30A5Q8TAD4 765 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 LINC01599Q8WXQ3 324 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 SEPT8Q92599 483 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 APBB2Q92870 758 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 LPPQ93052 612 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 CNTNAP3BQ96NU0 1288 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 MDFIQ99750 246 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 CNTNAP3Q9BZ76 1288 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 WNT8AQ9H1J5 351 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 CYP3A43Q9HB55 503 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 SLC38A7Q9NVC3 462 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 TUBGCP4Q9UGJ1 667 aa12.17□□□□□ -0.46
RTN1-203ENST00000395090 ELOA3CA0A087WX78 387 aaPredicted RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 A0A087X0T9 212 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 ELOA3DA6NLF2 546 aaPredicted RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 CYP26A1O43174 497 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 THP07101 528 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 FAM228BP0C875 321 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 CPB1P15086 417 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 MLH1P40692 756 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 AFF1P51825 1210 aaKnown RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 ZNF132P52740 706 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 BPIFB4P59827 614 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 SOX4Q06945 474 aaPredicted RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 MYO1EQ12965 1108 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 ELOA3BQ3SY89 546 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 ZNF667Q5HYK9 610 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 SLCO4C1Q6ZQN7 724 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 ELOA3Q8NG57 546 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 PPP1R13BQ96KQ4 1090 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 ELAC1Q9H777 363 aaKnown RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 RSAD1Q9HA92 442 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 LIN7BQ9HAP6 207 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 MIOSQ9NXC5 875 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 TRMT1Q9NXH9 659 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms