RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 TTC8Q8TAM2 541 aa14.62□□□□□ -0.07
GAPVD1-205ENST00000394084 PTPRN2Q92932 1015 aa14.62□□□□□ -0.07
GAPVD1-205ENST00000394084 TMEM134Q9H6X4 195 aa14.62□□□□□ -0.07
GAPVD1-205ENST00000394084 DONSONQ9NYP3 566 aa14.62□□□□□ -0.07
GAPVD1-205ENST00000394084 GJA3Q9Y6H8 435 aa14.62□□□□□ -0.07
GAPVD1-205ENST00000394084 PIK3R2O00459 728 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 FAM189A1O60320 539 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 MSCO60682 206 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 TOM1L1O75674 476 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ZWINTO95229 277 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 NEFHP12036 1026 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 EIF4BP23588 611 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ASPAP45381 313 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 STAT5BP51692 787 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 TAP1Q03518 808 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 PARP6Q2NL67 630 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 NPNTQ6UXI9 565 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 PCGF5Q86SE9 256 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 LRRC6Q86X45 466 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 IGDCC3Q8IVU1 814 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 RNF149Q8NC42 400 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 LBHD1Q9BQE6 289 aaPredicted RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 MRPL4Q9BYD3 311 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ACSS3Q9H6R3 686 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ZMYND8Q9ULU4 1186 aaPredicted RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 PEX11AO75192 247 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ATG7O95352 703 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 EIF3EP60228 445 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 TAF11Q15544 211 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 HADHQ16836 314 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 TRIM68Q6AZZ1 485 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 BBS12Q6ZW61 710 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ZC3H18Q86VM9 953 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 TRIM50Q86XT4 487 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 NIPA2Q8N8Q9 360 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 CPXM1Q96SM3 734 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 NIFKQ9BYG3 293 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 NRBP2Q9NSY0 501 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 PRKCBP05771 671 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 GJB1P08034 283 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 OAZ1P54368 228 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 SLC8A3P57103 927 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ADGRD1Q6QNK2 874 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 PDIK1LQ8N165 341 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 DCAKDQ8WVC6 231 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 NUDCD1Q96RS6 583 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 ZNF518BQ9C0D4 1074 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 KANSL3Q9P2N6 904 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 AFG3L2Q9Y4W6 797 aa14.61□□□□□ -0.07
GAPVD1-205ENST00000394084 OGTO15294 1046 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 ENTPD5O75356 428 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 KRT7P08729 469 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 TROVE2P10155 538 aaKnown RBP eCLIP14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 RBP3P10745 1247 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 RAD23BP54727 409 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 MMRN1Q13201 1228 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 KLHL38Q2WGJ6 581 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 ZPBP2Q6X784 338 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 MAB21L3Q8N8X9 362 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 INPP5DQ92835 1189 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 TTC17Q96AE7 1141 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 ZBTB10Q96DT7 871 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 RNPEPL1Q9HAU8 725 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 CYLDQ9NQC7 956 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 PCDHGC3Q9UN70 934 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 ADAMTS5Q9UNA0 930 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 CFAP69A5D8W1 941 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 SIGLEC16A6NMB1 481 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 SPDYE16A6NNV3 312 aaPredicted RBP14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 MT-ND3P03897 115 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 ERBB2P04626 1255 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 POLR2BP30876 1174 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 RFC5P40937 340 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 ELK3P41970 407 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 YWHAGP61981 247 aaKnown RBP eCLIP14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 CATSPERGQ6ZRH7 1159 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 POLNQ7Z5Q5 900 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 MZB1Q8WU39 189 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 ACO2Q99798 780 aaKnown RBP14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 MANSC1Q9H8J5 431 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 STRIP2Q9ULQ0 834 aa14.6□□□□□ -0.07
GAPVD1-205ENST00000394084 PHIPQ8WWQ0 1821 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 C2orf71A6NGG8 1288 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 C2CD2LO14523 706 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 B4GALT5O43286 388 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 AVILO75366 819 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 WFS1O76024 890 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 HOXC6P09630 235 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 MIPP30301 263 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 TCF7P36402 384 aaPredicted RBP14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 GCLCP48506 637 aaPredicted RBP14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 GMPSP49915 693 aaPredicted RBP14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 AP3M2P53677 418 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 YWHAEP62258 255 aaKnown RBP14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 TARBP2Q15633 366 aaKnown RBP14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 RAB6CQ53S08 254 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 CLNKQ7Z7G1 428 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 BANPQ8N9N5 519 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 SPATA18Q8TC71 538 aa14.59□□□□□ -0.07
GAPVD1-205ENST00000394084 PRR11Q96HE9 360 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms