RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PCIF1Q9H4Z3 704 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 PCDHGA5Q9Y5G8 931 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 RALGAPA1Q6GYQ0 2036 aa18.73■□□□□ 0.59
SNRPA1-202ENST00000394082 PPP6R2O75170 966 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 EGFP01133 1207 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 CKMP06732 381 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 ZNF806P0C7X5 589 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 WARSP23381 471 aaKnown RBP18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 PPP3CCP48454 512 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 AMPD3Q01432 767 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 E2F4Q16254 413 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 SCARA3Q6AZY7 606 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 SYT13Q7L8C5 426 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 LINC00301Q8NCQ3 95 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 OR5B17Q8NGF7 314 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 KBTBD7Q8WVZ9 684 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 PANK2Q9BZ23 570 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 TRIM9Q9C026 710 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 DUS2Q9NX74 493 aaKnown RBP18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 MAGEC2Q9UBF1 373 aaPredicted RBP18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 ARHGAP26Q9UNA1 814 aa18.72■□□□□ 0.59
SNRPA1-202ENST00000394082 SPTBN2O15020 2390 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 GREB1Q4ZG55 1949 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 ANAPC1Q9H1A4 1944 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 RNF40O75150 1001 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 EPN2O95208 641 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 NR1H3Q13133 447 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 EML3Q32P44 896 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 EPM2AIP1Q7L775 607 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 STKLD1Q8NE28 680 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 ZNF507Q8TCN5 953 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 SLC22A12Q96S37 553 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 SYT15Q9BQS2 421 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 TTLL2Q9BWV7 592 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 FBRSL1Q9HCM7 1045 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 HSPBP1Q9NZL4 362 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 EBF1Q9UH73 591 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 PTPRJQ12913 1337 aa18.71■□□□□ 0.59
SNRPA1-202ENST00000394082 LAMA1P25391 3075 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 SPAG17Q6Q759 2223 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 STX6O43752 255 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 TACC1O75410 805 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 HDCP19113 662 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 LMO2P25791 158 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 HOXD13P35453 343 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 IFNAR2P48551 515 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 NOP14P78316 857 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 KCNB1Q14721 858 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 CBWD2Q8IUF1 395 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 SCN4BQ8IWT1 228 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 PDILTQ8N807 584 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 MYCBPAPQ8TBZ2 947 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 CD101Q93033 1021 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 ACDQ96AP0 544 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 CYP2S1Q96SQ9 504 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 TRPC7Q9HCX4 862 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 CRTAC1Q9NQ79 661 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 UBE4BO95155 1302 aa18.7■□□□□ 0.58
SNRPA1-202ENST00000394082 TPRP12270 2363 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 EPG5Q9HCE0 2579 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 TRIM66O15016 1216 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 ATP2C2O75185 946 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 STAU1O95793 577 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 CCDC192P0DO97 292 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 CCDC142Q17RM4 750 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 PLA2G2CQ5R387 149 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 DENND5BQ6ZUT9 1274 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 TRAPPC11Q7Z392 1133 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 ARL14EPQ8N8R7 260 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 IQUBQ8NA54 791 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 SH3RF2Q8TEC5 729 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 MYLPFQ96A32 169 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 C8orf48Q96LL4 319 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 MAGEF1Q9HAY2 307 aa18.69■□□□□ 0.58
SNRPA1-202ENST00000394082 ACACBO00763 2458 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 C2orf78A6NCI8 922 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 AXIN1O15169 862 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 SPTLC2O15270 562 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 HCRTO43612 131 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 YEATS4O95619 227 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 NFATC1O95644 943 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 PDIA4P13667 645 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 BDNFP23560 247 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 HOXC13P31276 330 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 EHHADHQ08426 723 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 STK38Q15208 465 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 SNRNP35Q16560 246 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 PPM1JQ5JR12 505 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 LMBRD2Q68DH5 695 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 KBTBD6Q86V97 674 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 GLIS3Q8NEA6 775 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 NOC3LQ8WTT2 800 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 EZH1Q92800 747 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 PCED1BQ96HM7 432 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 FAM84AQ96KN4 292 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 CNTNAP3BQ96NU0 1288 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 C7orf25Q9BPX7 421 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 CNTNAP3Q9BZ76 1288 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 ARRDC1-AS1Q9H2J1 176 aa18.68■□□□□ 0.58
SNRPA1-202ENST00000394082 AGPAT3Q9NRZ7 376 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms