RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 RPL17P18621 184 aaKnown RBP25.66■■□□□ 1.7
LRFN4-202ENST00000393952 RGS7P49802 495 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 GPC5P78333 572 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 C1QBPQ07021 282 aaKnown RBP25.66■■□□□ 1.7
LRFN4-202ENST00000393952 PHLDB2Q86SQ0 1253 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 TJP2Q9UDY2 1190 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 SALL4Q9UJQ4 1053 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 PCDHA11Q9Y5I1 949 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 BACE2Q9Y5Z0 518 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 NCANO14594 1321 aa25.66■■□□□ 1.7
LRFN4-202ENST00000393952 ADAM12O43184 909 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 AP1G2O75843 785 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 BEST1O76090 585 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 URODP06132 367 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 BDNFP23560 247 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 CACNA2D1P54289 1103 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 PMF1Q6P1K2 205 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 LLGL2Q6P1M3 1020 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 C4orf50Q6ZRC1 276 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 SPATA2LQ8IUW3 424 aaPredicted RBP25.65■■□□□ 1.7
LRFN4-202ENST00000393952 NOX5Q96PH1 765 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 OXCT2Q9BYC2 517 aaPredicted RBP25.65■■□□□ 1.7
LRFN4-202ENST00000393952 TMEM30AQ9NV96 361 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 MYO1AQ9UBC5 1043 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 CHORDC1Q9UHD1 332 aaPredicted RBP25.65■■□□□ 1.7
LRFN4-202ENST00000393952 YBX2Q9Y2T7 364 aaKnown RBP25.65■■□□□ 1.7
LRFN4-202ENST00000393952 RWDD3Q9Y3V2 267 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 PAXBP1Q9Y5B6 917 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 CDY1Q9Y6F8 540 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 MACROD2A1Z1Q3 448 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 TNRC18O15417 2968 aaPredicted RBP25.65■■□□□ 1.7
LRFN4-202ENST00000393952 CPB1P15086 417 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 RRM1P23921 792 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 DNAJB2P25686 324 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 PBX2P40425 430 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 CYP4A22Q5TCH4 519 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 CLEC20AQ6ZU45 233 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 FBXO22Q8NEZ5 403 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 AUTS2Q8WXX7 1259 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 TRIM11Q96F44 468 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 SMARCD1Q96GM5 515 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 VCPIP1Q96JH7 1222 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 PGLYRP2Q96PD5 576 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 SMOQ99835 787 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 ST7Q9NRC1 585 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 CNOT8Q9UFF9 292 aaKnown RBP25.65■■□□□ 1.7
LRFN4-202ENST00000393952 MTUS1Q9ULD2 1270 aa25.65■■□□□ 1.7
LRFN4-202ENST00000393952 XPO1O14980 1071 aaKnown RBP25.64■■□□□ 1.69
LRFN4-202ENST00000393952 ERBB2P04626 1255 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 CYP1A2P05177 515 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 CALB1P05937 261 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 MYBL1P10243 752 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 MAP3K7CLP57077 242 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 NFE2Q16621 373 aaPredicted RBP25.64■■□□□ 1.69
LRFN4-202ENST00000393952 CLSTN3Q9BQT9 956 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 IRX2Q9BZI1 471 aaPredicted RBP25.64■■□□□ 1.69
LRFN4-202ENST00000393952 ZBP1Q9H171 429 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 ABI2Q9NYB9 513 aaPredicted RBP25.64■■□□□ 1.69
LRFN4-202ENST00000393952 STK39Q9UEW8 545 aa25.64■■□□□ 1.69
LRFN4-202ENST00000393952 BTNL10A8MVZ5 291 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 PIK3R2O00459 728 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 ZNF500O60304 480 aaPredicted RBP25.63■■□□□ 1.69
LRFN4-202ENST00000393952 SLC8A3P57103 927 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 GPR17Q13304 367 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 LIN9Q5TKA1 542 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 SLC8B1Q6J4K2 584 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 MSANTD4Q8NCY6 345 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 ZMIZ2Q8NF64 920 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 STK32AQ8WU08 396 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 RFFLQ8WZ73 363 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 PLVAPQ9BX97 442 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 SLC4A5Q9BY07 1137 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 SYNCQ9H7C4 482 aa25.63■■□□□ 1.69
LRFN4-202ENST00000393952 ALG13Q9NP73 1137 aaKnown RBP25.63■■□□□ 1.69
LRFN4-202ENST00000393952 PDE4DIPQ5VU43 2346 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.62■■□□□ 1.69
LRFN4-202ENST00000393952 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.62■■□□□ 1.69
LRFN4-202ENST00000393952 E5RJQ4 531 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 GABBR2O75899 941 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 CYP2F1P24903 491 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 OR1D2P34982 312 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 PLA2G4AP47712 749 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 RGS19P49795 217 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 RNF19BQ6ZMZ0 732 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 PIGZQ86VD9 579 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 C18orf8Q96DM3 657 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 KCNK16Q96T55 309 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 AVENQ9NQS1 362 aaPredicted RBP25.62■■□□□ 1.69
LRFN4-202ENST00000393952 MRPL17Q9NRX2 175 aaKnown RBP25.62■■□□□ 1.69
LRFN4-202ENST00000393952 PCDHB5Q9Y5E4 795 aa25.62■■□□□ 1.69
LRFN4-202ENST00000393952 A0A0A6YYK5 440 aaPredicted RBP25.61■■□□□ 1.69
LRFN4-202ENST00000393952 C5orf67F2Z3F1 127 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 BUB1O43683 1085 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 CTSAP10619 480 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 BMP8BP34820 402 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 GABRB2P47870 512 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 ROR1Q01973 937 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 ATAD1Q8NBU5 361 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 SLC35G2Q8TBE7 412 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 IPO4Q8TEX9 1081 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms