RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 MAGED2Q9UNF1 606 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 DOCK8Q8NF50 2099 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 A0A1W2PRU2 124 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 F8VP50 259 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 PES1O00541 588 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 MOSPD3O75425 235 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 NOL4O94818 638 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 TPM2P07951 284 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 ALADP13716 330 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 CCDC130P13994 396 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 HMGA1P17096 107 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 GJA1P17302 382 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 CDC25CP30307 473 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 RAD23BP54727 409 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 MTMR3Q13615 1198 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 EXOC3L4Q17RC7 722 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 CDKAL1Q5VV42 579 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 RRAGAQ7L523 313 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 FUKQ8N0W3 1084 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 SHKBP1Q8TBC3 707 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 SLC2A14Q8TDB8 520 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 SMARCD1Q96GM5 515 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 HNRNPABQ99729 332 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 GPR88Q9GZN0 384 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 ATXN3LQ9H3M9 355 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 EHD2Q9NZN4 543 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 UXTQ9UBK9 157 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 MUTYHQ9UIF7 546 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 PTPRDP23468 1912 aa20.17■□□□□ 0.82
PDLIM7-204ENST00000393546 SYCE3A1L190 88 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 SMTNL1A8MU46 457 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 AP1G2O75843 785 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 SLC9A1P19634 815 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 CDK11BP21127 795 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 GCNT1Q02742 428 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 TEAD2Q15562 447 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 ARHGAP15Q53QZ3 475 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 MIIPQ5JXC2 388 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 GAREM2Q75VX8 874 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 ARHGEF19Q8IW93 802 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 SLC4A11Q8NBS3 891 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 ANKRD20A12PQ8NF67 263 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 TRMT2BQ96GJ1 504 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 FAM81BQ96LP2 452 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 BPIFA3Q9BQP9 254 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 KCNK12Q9HB15 430 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 UBE2TQ9NPD8 197 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 PCDHB4Q9Y5E5 795 aa20.16■□□□□ 0.82
PDLIM7-204ENST00000393546 CUL9Q8IWT3 2517 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 DCXO43602 365 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 ASGR2P07307 311 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 FAM200BP0CF97 657 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 ADORA2BP29275 332 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 CACNA2D1P54289 1103 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 PTPN21Q16825 1174 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 PHLDB3Q6NSJ2 640 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 TRIM65Q6PJ69 517 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 DENND5BQ6ZUT9 1274 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 MTSS1LQ765P7 747 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 ENOSF1Q7L5Y1 443 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 AOPEPQ8N6M6 819 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 UBR7Q8N806 425 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 STKLD1Q8NE28 680 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 KHSRPQ92945 711 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 JAKMIP2Q96AA8 810 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 MYRFLQ96LU7 910 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 SLITRK6Q9H5Y7 841 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 IL21Q9HBE4 155 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 DMAP1Q9NPF5 467 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 TAB2Q9NYJ8 693 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 KIAA1257Q9ULG3 409 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 SORCS3Q9UPU3 1222 aa20.15■□□□□ 0.82
PDLIM7-204ENST00000393546 ANHXE9PGG2 379 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 PI4K2BG5E9Z4 385 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 NRG2O14511 850 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 F11P03951 625 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 PON1P27169 355 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 MFAP3P55082 362 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 NCAPHQ15003 741 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 KRT31Q15323 416 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 TMEM270Q6UE05 265 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 NUP93Q8N1F7 819 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 KAT5Q92993 513 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 KCNK16Q96T55 309 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 FUCA2Q9BTY2 467 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 VPS16Q9H269 839 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 KRT82Q9NSB4 513 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 TMEM30AQ9NV96 361 aa20.14■□□□□ 0.81
PDLIM7-204ENST00000393546 RTN3O95197 1032 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 ACO1P21399 889 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 ZNF165P49910 485 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 MAP3K7CLP57077 242 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 TDGQ13569 410 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 HTR4Q13639 388 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 GPR158Q5T848 1215 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 PPP1R26Q5T8A7 1209 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 ARHGAP17Q68EM7 881 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 PARM1Q6UWI2 310 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 RSAD2Q8WXG1 361 aa20.13■□□□□ 0.81
PDLIM7-204ENST00000393546 MRPS31Q92665 395 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms