RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 EMC1Q8N766 993 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 DIS3LQ8TF46 1054 aaKnown RBP9.11□□□□□ -0.95
TDP1-203ENST00000393454 SLC35F5Q8WV83 523 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 APBB2Q92870 758 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 SYT15Q9BQS2 421 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 PLEKHA4Q9H4M7 779 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 KANSL3Q9P2N6 904 aa9.11□□□□□ -0.95
TDP1-203ENST00000393454 TTC7AQ9ULT0 858 aaPredicted RBP9.11□□□□□ -0.95
TDP1-203ENST00000393454 SCN5AQ14524 2016 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 GOLGA6L10A0A0M3HER8 536 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 TARSL2A2RTX5 802 aaKnown RBP9.1□□□□□ -0.95
TDP1-203ENST00000393454 PSTPIP1O43586 416 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 GRAP2O75791 330 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 ZMYND10O75800 440 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 DDHD2O94830 711 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 LCP1P13796 627 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 H2AFXP16104 143 aaPredicted RBP9.1□□□□□ -0.95
TDP1-203ENST00000393454 AARSP49588 968 aaKnown RBP eCLIP9.1□□□□□ -0.95
TDP1-203ENST00000393454 MNX1P50219 401 aaPredicted RBP9.1□□□□□ -0.95
TDP1-203ENST00000393454 CLCN6P51797 869 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 SCUBE3Q8IX30 993 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 RSPH1Q8WYR4 309 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 HNRNPABQ99729 332 aaKnown RBP9.1□□□□□ -0.95
TDP1-203ENST00000393454 SLC4A5Q9BY07 1137 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 DDX47Q9H0S4 455 aaKnown RBP9.1□□□□□ -0.95
TDP1-203ENST00000393454 TBC1D13Q9NVG8 400 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 TMEM59LQ9UK28 342 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 TET1Q8NFU7 2136 aa9.1□□□□□ -0.95
TDP1-203ENST00000393454 ARHGEF37A1IGU5 675 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 F8W810 466 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 CCDC188H7C350 402 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 INPPL1O15357 1258 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 ERLIN1O75477 346 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 ITGB1P05556 798 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TUBBP07437 444 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 HSPA8P11142 646 aaKnown RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 COL6A1P12109 1028 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 PAX3P23760 479 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 PCSK1P29120 753 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TKTP29401 623 aaKnown RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 LBX1P52954 281 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 GSCP56915 257 aaPredicted RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 VSNL1P62760 191 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 SLC6A3Q01959 620 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 ZNF252P-AS1Q0IIN9 211 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 BRD3Q15059 726 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 GLE1Q53GS7 698 aaKnown RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 KIAA0319Q5VV43 1072 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TMCO3Q6UWJ1 677 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TMEM110Q86TL2 294 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 FUKQ8N0W3 1084 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 DNAJC5GQ8N7S2 189 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 HDAC7Q8WUI4 952 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TOX2Q96NM4 488 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 DUSP16Q9BY84 665 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 CRTAC1Q9NQ79 661 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TMEM39AQ9NV64 488 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 DSEQ9UL01 958 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 CDH9Q9ULB4 789 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 PRG3Q9Y2Y8 225 aaPredicted RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 MYBPHLA2RUH7 354 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 B4GALT3O60512 393 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TADA2AO75478 443 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 ZRANB2O95218 330 aaKnown RBP eCLIP9.09□□□□□ -0.95
TDP1-203ENST00000393454 FAM200BP0CF97 657 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 TCF4P15884 667 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 PDGFRAP16234 1089 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 GPD1P21695 349 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 MCM3P25205 808 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 CETN2P41208 172 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 ACADSBP45954 432 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 GATMP50440 423 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 SMC1AQ14683 1233 aaKnown RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 TCTN1Q2MV58 587 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 CD300LGQ6UXG3 332 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 SLC13A5Q86YT5 568 aaPredicted RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 COLGALT2Q8IYK4 626 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 THEM5Q8N1Q8 247 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 STK32AQ8WU08 396 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 RXFP2Q8WXD0 754 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 B3GNT5Q9BYG0 378 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 ELAC1Q9H777 363 aaKnown RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 ZWILCHQ9H900 591 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 KLHL11Q9NVR0 708 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 ASNSD1Q9NWL6 643 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 DNAJB4Q9UDY4 337 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 DMGDHQ9UI17 866 aaKnown RBP9.09□□□□□ -0.95
TDP1-203ENST00000393454 RAB21Q9UL25 225 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 MTUS1Q9ULD2 1270 aa9.09□□□□□ -0.95
TDP1-203ENST00000393454 M0QZQ0 153 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 XPO1O14980 1071 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 PAPSS1O43252 624 aaPredicted RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 SART1O43290 800 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 RAD51CO43502 376 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 AP1G2O75843 785 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 RNF8O76064 485 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PARNO95453 639 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 KRT1P04264 644 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 NPR3P17342 541 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 MAP3K7CLP57077 242 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms