RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 CNOT7Q9UIV1 285 aaKnown RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 PTPRMP28827 1452 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 AFF2P51816 1311 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 DPYSL4O14531 572 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 NCAM1P13591 858 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 GARTP22102 1010 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 RUNX1T1Q06455 604 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 ST3GAL1Q11201 340 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 TBX2Q13207 712 aaPredicted RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 CCDC92Q53HC0 331 aaPredicted RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 C5orf58C9J3I9 102 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 CLASP2O75122 1294 aaKnown RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 ANXA9O76027 345 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 AQP5P55064 265 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 SEZ6Q53EL9 994 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 MICALL2Q8IY33 904 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 TTC30BQ8N4P2 665 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 HDAC7Q8WUI4 952 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 SLC20A1Q8WUM9 679 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 FAM162AQ96A26 154 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 TMEM121Q9BTD3 319 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 RXFP1Q9HBX9 757 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 EXOSC4Q9NPD3 245 aaKnown RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.62□□□□□ -0.23
LCA5-202ENST00000392959 ADGRA2Q96PE1 1338 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 SDR42E2A6NKP2 422 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 PRPF4O43172 522 aaKnown RBP eCLIP13.62□□□□□ -0.23
LCA5-202ENST00000392959 SKAP2O75563 359 aaPredicted RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 KLRK1P26718 216 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 PTPN4P29074 926 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 NPTX2P47972 431 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 TMEM62Q0P6H9 643 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 PTRHD1Q6GMV3 140 aaKnown RBP13.62□□□□□ -0.23
LCA5-202ENST00000392959 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 CNBD2Q96M20 576 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 RBBP8Q99708 897 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 ZNF518BQ9C0D4 1074 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 SLC38A7Q9NVC3 462 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 SFMBT1Q9UHJ3 866 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 NAALADL1Q9UQQ1 740 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 V9GYQ6 96 aa13.62□□□□□ -0.23
LCA5-202ENST00000392959 PMPCBO75439 489 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 SASH3O75995 380 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 SUPT7LO94864 414 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 GHRP10912 638 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 TMED10P49755 219 aaKnown RBP13.61□□□□□ -0.23
LCA5-202ENST00000392959 SKOR1P84550 965 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 ITPK1Q13572 414 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 TRIM60Q495X7 471 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 C11orf63Q6NUN7 778 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 STX19Q8N4C7 294 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 DDI1Q8WTU0 396 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 PAWRQ96IZ0 340 aaKnown RBP13.61□□□□□ -0.23
LCA5-202ENST00000392959 EVPLLA8MZ36 301 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 TIMM44O43615 452 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 VCAM1P19320 739 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 MYBPC2Q14324 1141 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 RASA2Q15283 850 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 OTULINQ96BN8 352 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 ELP3Q9H9T3 547 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 GAS2O43903 313 aaKnown RBP13.61□□□□□ -0.23
LCA5-202ENST00000392959 FAM200BP0CF97 657 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 AKT1P31749 480 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 PDK2Q15119 407 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 DNAAF5Q86Y56 855 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 ACTL9Q8TC94 416 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 OLFML3Q9NRN5 406 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 SOX13Q9UN79 622 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 ARP10275 920 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 RAP1GDS1P52306 607 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 AGAP9Q5VTM2 703 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 SPOCD1Q6ZMY3 1216 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 ZNF786Q8N393 782 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 ECSITQ9BQ95 431 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 DDIT4Q9NX09 232 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 KIAA1257Q9ULG3 409 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 DNAJC16Q9Y2G8 782 aa13.61□□□□□ -0.23
LCA5-202ENST00000392959 M0QYT0 321 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 ICAM1P05362 532 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 CTSHP09668 335 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 CCDC159P0C7I6 412 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 CHRM3P20309 590 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 SERPINB5P36952 375 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 DEFA1P59665 94 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 DEFA3P59666 94 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 DEPDC1Q5TB30 811 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 MFSD14CQ5VZR4 134 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 SLC47A2Q86VL8 602 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 CHST13Q8NET6 341 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 MTMR12Q9C0I1 747 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 TMEM39BQ9GZU3 492 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 NEXMIFQ5QGS0 1516 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 RHOBTB1O94844 696 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms