RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 DUSP9Q99956 384 aaKnown RBP12.61□□□□□ -0.39
RFC4-202ENST00000392481 TRMT61BQ9BVS5 477 aaKnown RBP12.61□□□□□ -0.39
RFC4-202ENST00000392481 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
RFC4-202ENST00000392481 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
RFC4-202ENST00000392481 APOBEC3GQ9HC16 384 aaKnown RBP12.61□□□□□ -0.39
RFC4-202ENST00000392481 METTL14Q9HCE5 456 aaKnown RBP12.61□□□□□ -0.39
RFC4-202ENST00000392481 ARHGEF3Q9NR81 526 aa12.61□□□□□ -0.39
RFC4-202ENST00000392481 CA14Q9ULX7 337 aa12.61□□□□□ -0.39
RFC4-202ENST00000392481 MAGED2Q9UNF1 606 aaPredicted RBP12.61□□□□□ -0.39
RFC4-202ENST00000392481 KMT2EQ8IZD2 1858 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 GREB1Q4ZG55 1949 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 HEPACAM2A8MVW5 462 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■□□□□ 9.4
RFC4-202ENST00000392481 ANXA13P27216 316 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 NDST1P52848 882 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 NUBP1P53384 320 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 CYP4F8P98187 520 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 PAK1Q13153 545 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 DCAF17Q5H9S7 520 aaPredicted RBP12.6□□□□□ -0.39
RFC4-202ENST00000392481 TCERG1LQ5VWI1 586 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 VITQ6UXI7 678 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 MFSD6LQ8IWD5 586 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 CRYBG2Q8N1P7 616 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 STKLD1Q8NE28 680 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 FLCNQ8NFG4 579 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 MRPS31Q92665 395 aaKnown RBP12.6□□□□□ -0.39
RFC4-202ENST00000392481 SEMA4DQ92854 862 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 PRRX2Q99811 253 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■■■■■ 108.7
RFC4-202ENST00000392481 RAB20Q9NX57 234 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 OBP2AQ9NY56 170 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 EHD2Q9NZN4 543 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 ATP8B3O60423 1300 aa12.6□□□□□ -0.39
RFC4-202ENST00000392481 F8VP50 259 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 TRIM21P19474 475 aaKnown RBP12.59□□□□□ -0.39
RFC4-202ENST00000392481 AOC1P19801 751 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 STARD6P59095 220 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 PRKCQQ04759 706 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 GRM2Q14416 872 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 SLC44A4Q53GD3 710 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 IER5LQ5T953 404 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 CWF19L1Q69YN2 538 aaKnown RBP12.59□□□□□ -0.39
RFC4-202ENST00000392481 DENND5BQ6ZUT9 1274 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 MON1AQ86VX9 555 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 TTC39CQ8N584 583 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 DNASE1L2Q92874 299 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 IRF7Q92985 503 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 RSPRY1Q96DX4 576 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 ZNF518BQ9C0D4 1074 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 BRD9Q9H8M2 597 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 TRPV5Q9NQA5 729 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 COQ4Q9Y3A0 265 aa12.59□□□□□ -0.39
RFC4-202ENST00000392481 NUP210Q8TEM1 1887 aaPredicted RBP12.59□□□□□ -0.39
RFC4-202ENST00000392481 ZNF638Q14966 1978 aaKnown RBP12.58□□□□□ -0.4
RFC4-202ENST00000392481 CLDN5O00501 218 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 STK25O00506 426 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 DPYSL4O14531 572 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 LRRN2O75325 713 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 TADA3O75528 432 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 RFX1P22670 979 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 GDI1P31150 447 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 MLF2Q15773 248 aaPredicted RBP12.58□□□□□ -0.4
RFC4-202ENST00000392481 CCDC40Q4G0X9 1142 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 CBWD6Q4V339 395 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 WDR44Q5JSH3 913 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 CBWD3Q5JTY5 395 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 CBWD5Q5RIA9 395 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 FAM35AQ86V20 835 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 FUKQ8N0W3 1084 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 TMEM105Q8N8V8 129 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 MAB21L3Q8N8X9 362 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 SMARCD1Q96GM5 515 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 IPO9Q96P70 1041 aaKnown RBP12.58□□□□□ -0.4
RFC4-202ENST00000392481 TTLL2Q9BWV7 592 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 DNAI2Q9GZS0 605 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 FAM124BQ9H5Z6 455 aaPredicted RBP12.58□□□□□ -0.4
RFC4-202ENST00000392481 TMEM30AQ9NV96 361 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 HMGXB4Q9UGU5 601 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 NCANO14594 1321 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 OBSL1O75147 1896 aa12.58□□□□□ -0.4
RFC4-202ENST00000392481 ZNF263O14978 683 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 PMM2O15305 246 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 PI15O43692 258 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 CILPO75339 1184 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 PRAMEF12O95522 483 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 FGFR1OPO95684 399 aaKnown RBP12.57□□□□□ -0.4
RFC4-202ENST00000392481 GNA14O95837 355 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 AVPR1AP37288 418 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms