RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DUOXA2Q1HG44 320 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 FAM133BQ5BKY9 247 aaKnown RBP19.97■□□□□ 0.79
CCDC50-202ENST00000392456 LONP2Q86WA8 852 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 ANKS4BQ8N8V4 417 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 SLC30A5Q8TAD4 765 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 ZNF653Q96CK0 615 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 B4GALT4O60513 344 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 SUPT3HO75486 399 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 TRPC1P48995 793 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 MFAP3P55082 362 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 ATP11AP98196 1134 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 PXYLP1Q8TE99 480 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 FAM136AQ96C01 138 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 TAS2R14Q9NYV8 317 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 NENFQ9UMX5 172 aa19.97■□□□□ 0.79
CCDC50-202ENST00000392456 ANK1P16157 1881 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 CTSHP09668 335 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 RARAP10276 462 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 GUCY2FP51841 1108 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 MRPS25P82663 173 aaKnown RBP19.96■□□□□ 0.79
CCDC50-202ENST00000392456 SULT2A1Q06520 285 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 LHX8Q68G74 356 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 JADE1Q6IE81 842 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 ALKBH5Q6P6C2 394 aaKnown RBP19.96■□□□□ 0.79
CCDC50-202ENST00000392456 ZNF365Q70YC5 407 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 PTCH2Q9Y6C5 1203 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 THSD7BQ9C0I4 1608 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.96■□□□□ 0.79
CCDC50-202ENST00000392456 HNRNPRO43390 633 aaKnown RBP19.96■□□□□ 0.79
CCDC50-202ENST00000392456 FAM153BP0C7A2 387 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 MSH2P43246 934 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 P3H1Q32P28 736 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 FAM153CQ494X1 144 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 NOP9Q86U38 636 aaKnown RBP19.96■□□□□ 0.79
CCDC50-202ENST00000392456 U2AF1L4Q8WU68 220 aaKnown RBP19.96■□□□□ 0.79
CCDC50-202ENST00000392456 INIPQ9NRY2 104 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 FAM153AQ9UHL3 310 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 SCOCQ9UIL1 159 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 ZMYND8Q9ULU4 1186 aaPredicted RBP19.96■□□□□ 0.79
CCDC50-202ENST00000392456 TMED5Q9Y3A6 229 aa19.96■□□□□ 0.79
CCDC50-202ENST00000392456 MYCP01106 439 aaPredicted RBP19.95■□□□□ 0.78
CCDC50-202ENST00000392456 PEX5P50542 639 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 NOP14P78316 857 aaKnown RBP19.95■□□□□ 0.78
CCDC50-202ENST00000392456 CDC42EP1Q00587 391 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 GCNT1Q02742 428 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 LSAMPQ13449 338 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 WDR44Q5JSH3 913 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 TRPM8Q7Z2W7 1104 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 EPS8L1Q8TE68 723 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 SH3TC2Q8TF17 1288 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 C1orf112Q9NSG2 853 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 SNTG2Q9NY99 539 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 CNOT8Q9UFF9 292 aaKnown RBP19.95■□□□□ 0.78
CCDC50-202ENST00000392456 SIX4Q9UIU6 781 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 CAPN6Q9Y6Q1 641 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.95■□□□□ 0.78
CCDC50-202ENST00000392456 PSMD7P51665 324 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 SH2D4BQ5SQS7 431 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 CREG2Q8IUH2 290 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 C1orf127Q8N9H9 656 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 CHMP6Q96FZ7 201 aa19.95■□□□□ 0.78
CCDC50-202ENST00000392456 PIN4Q9Y237 131 aaKnown RBP19.95■□□□□ 0.78
CCDC50-202ENST00000392456 NOC2LQ9Y3T9 749 aaKnown RBP19.95■□□□□ 0.78
CCDC50-202ENST00000392456 BUB1O43683 1085 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ZC3H11AO75152 810 aaKnown RBP eCLIP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 MOCS3O95396 460 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 TMEM191BP0C7N4 346 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CHRNB2P17787 502 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CST5P28325 142 aaPredicted RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 MLH1P40692 756 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CRYBB1P53674 252 aaPredicted RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 PPP2R2AP63151 447 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ARHGAP18Q8N392 663 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 SPATA4Q8NEY3 305 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 VTI1AQ96AJ9 217 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ADPGKQ9BRR6 497 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CELF4Q9BZC1 486 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 NXF3Q9H4D5 531 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 LUC7LQ9NQ29 371 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 TRMT13Q9NUP7 481 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 NKX1-2Q9UD57 310 aaPredicted RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 NOCTQ9UK39 431 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 DAAM1Q9Y4D1 1078 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 TRIM17Q9Y577 477 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CDY2AQ9Y6F7 541 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 TMEM247A6NEH6 219 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 PJA2O43164 708 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ASS1P00966 412 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CHRNA1P02708 482 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ACO1P21399 889 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 NAB2Q15742 525 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CNPY1Q3B7I2 92 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 TAF2Q6P1X5 1199 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 SLC27A1Q6PCB7 646 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ZNF554Q86TJ5 538 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 SERINC5Q86VE9 423 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 NME8Q8N427 588 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 CXorf38Q8TB03 319 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 FBF1Q8TES7 1133 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ACAP3Q96P50 834 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms