RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 XKR4Q5GH76 650 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 UBXN11Q5T124 520 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 UBAP2Q5T6F2 1119 aaKnown RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 PPP1R26Q5T8A7 1209 aaPredicted RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 UNC93AQ86WB7 457 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 CCHCR1Q8TD31 782 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 TSPAN18Q96SJ8 248 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 APOL6Q9BWW8 343 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 ZFYVE28Q9HCC9 887 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 ASNSD1Q9NWL6 643 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 CWC15Q9P013 229 aaKnown RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 ZNF148Q9UQR1 794 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 SMIM28A0A1B0GU29 152 aa20.08■□□□□ 0.81
ERCC2-203ENST00000391944 CD4P01730 458 aa20.08■□□□□ 0.81
ERCC2-203ENST00000391944 KDELR1P24390 212 aa20.08■□□□□ 0.81
ERCC2-203ENST00000391944 CHKAP35790 457 aa20.08■□□□□ 0.81
ERCC2-203ENST00000391944 MDH1P40925 334 aaKnown RBP20.08■□□□□ 0.81
ERCC2-203ENST00000391944 ZNF143P52747 638 aaPredicted RBP20.08■□□□□ 0.81
ERCC2-203ENST00000391944 PURAQ00577 322 aaKnown RBP20.08■□□□□ 0.81
ERCC2-203ENST00000391944 ACOT1Q86TX2 421 aa20.08■□□□□ 0.81
ERCC2-203ENST00000391944 NKD2Q969F2 451 aaPredicted RBP20.08■□□□□ 0.81
ERCC2-203ENST00000391944 CDC42EP4Q9H3Q1 356 aaKnown RBP20.08■□□□□ 0.81
ERCC2-203ENST00000391944 NME7Q9Y5B8 376 aa20.08■□□□□ 0.81
ERCC2-203ENST00000391944 E5RJQ4 531 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 PIRO00625 290 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 KCNE1P15382 129 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 MAGOHP61326 146 aaKnown RBP20.08■□□□□ 0.8
ERCC2-203ENST00000391944 GUCY1A3Q02108 690 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 OASLQ15646 514 aaKnown RBP20.08■□□□□ 0.8
ERCC2-203ENST00000391944 SMTNL2Q2TAL5 461 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 KCNT1Q5JUK3 1230 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 ALLCQ8N6M5 410 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 C7orf31Q8N865 590 aa20.08■□□□□ 0.8
ERCC2-203ENST00000391944 CMASQ8NFW8 434 aaPredicted RBP20.08■□□□□ 0.8
ERCC2-203ENST00000391944 DCDC2CA8MYV0 355 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 SLC10A3P09131 477 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 SETSIPP0DME0 302 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 MIPP30301 263 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 PCK1P35558 622 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 VCPP55072 806 aaKnown RBP20.07■□□□□ 0.8
ERCC2-203ENST00000391944 PPP2R2AP63151 447 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 SOWAHAQ2M3V2 549 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 C6orf118Q5T5N4 469 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 OR6B2Q6IFH4 312 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 FAM183BPQ6ZVS7 135 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 CNPY3Q9BT09 278 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 SLC12A6Q9UHW9 1150 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 C2CD4BA6NLJ0 364 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 ITGAVP06756 1048 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 AKR1A1P14550 325 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 IZUMO3Q5VZ72 239 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 TTC30AQ86WT1 665 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 RNF39Q9H2S5 420 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 RNF19AQ9NV58 838 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 PCSK1NQ9UHG2 260 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 USP18Q9UMW8 372 aa20.07■□□□□ 0.8
ERCC2-203ENST00000391944 XPOTO43592 962 aaKnown RBP20.06■□□□□ 0.8
ERCC2-203ENST00000391944 TRUB2O95900 331 aaKnown RBP20.06■□□□□ 0.8
ERCC2-203ENST00000391944 GPD1P21695 349 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 LSP1P33241 339 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 SKIDA1Q1XH10 827 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 FBXO47Q5MNV8 452 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 HIBCHQ6NVY1 386 aaPredicted RBP20.06■□□□□ 0.8
ERCC2-203ENST00000391944 PMF1Q6P1K2 205 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 FOXR1Q6PIV2 292 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 BBS12Q6ZW61 710 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 OR6B3Q8NGW1 331 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 SLC35B2Q8TB61 432 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 SLC35F5Q8WV83 523 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 SLC4A5Q9BY07 1137 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 FRMD8P1Q9BZ68 369 aaPredicted RBP20.06■□□□□ 0.8
ERCC2-203ENST00000391944 KLK14Q9P0G3 267 aa20.06■□□□□ 0.8
ERCC2-203ENST00000391944 DUSP11O75319 330 aaKnown RBP20.05■□□□□ 0.8
ERCC2-203ENST00000391944 P3H1Q32P28 736 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 ARHGAP17Q68EM7 881 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 TMEM110Q86TL2 294 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 PRUNE1Q86TP1 453 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 TTC13Q8NBP0 860 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 UHMK1Q8TAS1 419 aaKnown RBP20.05■□□□□ 0.8
ERCC2-203ENST00000391944 BCAS4Q8TDM0 211 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 RXFP2Q8WXD0 754 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 FOXP3Q9BZS1 431 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 ROPN1BQ9BZX4 212 aaPredicted RBP20.05■□□□□ 0.8
ERCC2-203ENST00000391944 ROPN1Q9HAT0 212 aaPredicted RBP20.05■□□□□ 0.8
ERCC2-203ENST00000391944 GDAP2Q9NXN4 497 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 TLDC2A0PJX2 215 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 PIK3R2O00459 728 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 TTC4O95801 387 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 PDGFRAP16234 1089 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 CRHR2Q13324 411 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 TRNP1Q6NT89 227 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 GLIS1Q8NBF1 620 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 KCTD6Q8NC69 237 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 STK32AQ8WU08 396 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 HAUS1Q96CS2 278 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 DDX23Q9BUQ8 820 aaKnown RBP20.05■□□□□ 0.8
ERCC2-203ENST00000391944 ADAM7Q9H2U9 754 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 FAM49BQ9NUQ9 324 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 HESX1Q9UBX0 185 aa20.05■□□□□ 0.8
ERCC2-203ENST00000391944 A8MXQ7 604 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms