RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 RAB20Q9NX57 234 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 CTNND2Q9UQB3 1225 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 COQ4Q9Y3A0 265 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 NME7Q9Y5B8 376 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 NUP210Q8TEM1 1887 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-203ENST00000391855 PTPRDP23468 1912 aa13.49□□□□□ -0.25
GGPS1-203ENST00000391855 PMM2O15305 246 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 F11P03951 625 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 PSMC3P17980 439 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 RFX1P22670 979 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 GPR15P49685 360 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 SPOPLQ6IQ16 392 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 PHLDB3Q6NSJ2 640 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 MFSD6LQ8IWD5 586 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 IRF7Q92985 503 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 SLC35C1Q96A29 364 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 DUSP9Q99956 384 aaKnown RBP13.48□□□□□ -0.25
GGPS1-203ENST00000391855 TRMT61BQ9BVS5 477 aaKnown RBP13.48□□□□□ -0.25
GGPS1-203ENST00000391855 SDCBP2Q9H190 292 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 NUP62CLQ9H1M0 184 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 KIF9Q9HAQ2 790 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 TRPV5Q9NQA5 729 aa13.48□□□□□ -0.25
GGPS1-203ENST00000391855 MAGED2Q9UNF1 606 aaPredicted RBP13.48□□□□□ -0.25
GGPS1-203ENST00000391855 NRG2O14511 850 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 DPYSL4O14531 572 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 P4HA2O15460 535 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 PFKLP17858 780 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 AVPR2P30518 371 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 PPP3CCP48454 512 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 PDE6CP51160 858 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CDR1P51861 262 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 NDST1P52848 882 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 GPC5P78333 572 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CYP4F8P98187 520 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CETN1Q12798 172 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 MLF2Q15773 248 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CAMK4Q16566 473 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 ASTLQ6HA08 431 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 FAM35AQ86V20 835 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 MLKLQ8NB16 471 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 SMARCD1Q96GM5 515 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 TTLL2Q9BWV7 592 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 NT5C1AQ9BXI3 368 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 B3GNT5Q9BYG0 378 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 ZNF518BQ9C0D4 1074 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 APOBEC3GQ9HC16 384 aaKnown RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 DMAP1Q9NPF5 467 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CA14Q9ULX7 337 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 HEPACAM2A8MVW5 462 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 F8VP50 259 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 RTN3O95197 1032 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 PDGFBP01127 241 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CCDC192P0DO97 292 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 AOC1P19801 751 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 AVPR1AP37288 418 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 MARSP56192 900 aaKnown RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 YWHAEP62258 255 aaKnown RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 FCHO2Q0JRZ9 810 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CBWD6Q4V339 395 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CBWD3Q5JTY5 395 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CBWD5Q5RIA9 395 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 STXBP5Q5T5C0 1151 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 SDHAF4Q5VUM1 108 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CWF19L1Q69YN2 538 aaKnown RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 VITQ6UXI7 678 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 ACOT1Q86TX2 421 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 MON1AQ86VX9 555 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CMTM8Q8IZV2 173 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 CELF5Q8N6W0 485 aaKnown RBP13.47□□□□□ -0.25
GGPS1-203ENST00000391855 FLCNQ8NFG4 579 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 MED10Q9BTT4 135 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 PLA2G2FQ9BZM2 168 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 DACH1Q9UI36 760 aa13.47□□□□□ -0.25
GGPS1-203ENST00000391855 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.25
GGPS1-203ENST00000391855 KRBA1A5PL33 1030 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 ZNF263O14978 683 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 CHADO15335 359 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 CILPO75339 1184 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 TBXAS1P24557 533 aaPredicted RBP13.46□□□□□ -0.26
GGPS1-203ENST00000391855 VIPR2P41587 438 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 FMO5P49326 533 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 STARD6P59095 220 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 PLCB2Q00722 1185 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.26
GGPS1-203ENST00000391855 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 C1orf228Q6PIY5 440 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 TMEM150AQ86TG1 271 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms