RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PDE1AP54750 535 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 FGL2Q14314 439 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 SUPT20HL1Q3ZLR7 823 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 AMOTQ4VCS5 1084 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 CEP78Q5JTW2 689 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 KIAA1614Q5VZ46 1190 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 DPY19L3Q6ZPD9 716 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 Q6ZWC4 215 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 DNAJC5GQ8N7S2 189 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 ZBTB34Q8NCN2 500 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 CYP2W1Q8TAV3 490 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 MESP1Q9BRJ9 268 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 QTRT1Q9BXR0 403 aaKnown RBP4.24□□□□□ -1.73
TRAV40-201ENST00000390467 ZMAT3Q9HA38 289 aaKnown RBP4.24□□□□□ -1.73
TRAV40-201ENST00000390467 NMRK2Q9NPI5 230 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 ZNF180Q9UJW8 692 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 PNMA8BQ9ULN7 279 aaPredicted RBP4.24□□□□□ -1.73
TRAV40-201ENST00000390467 SHOC2Q9UQ13 582 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 TMX2Q9Y320 296 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 SNX14Q9Y5W7 946 aa4.24□□□□□ -1.73
TRAV40-201ENST00000390467 hCG_2014768A0A024R1R8 64 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 TMEM233B4DJY2 109 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 TJP3O95049 919 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 PDE8BO95263 885 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 CYP2D6P10635 497 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 SFPQP23246 707 aaKnown RBP eCLIP4.23□□□□□ -1.73
TRAV40-201ENST00000390467 PDE6CP51160 858 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 TUBA4AP68366 448 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 E2F2Q14209 437 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 CYP1B1Q16678 543 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 LY6KQ17RY6 165 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 SLC44A4Q53GD3 710 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 KIRREL2Q6UWL6 708 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 EPM2AIP1Q7L775 607 aaPredicted RBP4.23□□□□□ -1.73
TRAV40-201ENST00000390467 YTHDF3Q7Z739 585 aaKnown RBP4.23□□□□□ -1.73
TRAV40-201ENST00000390467 NEK8Q86SG6 692 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 DAAM2Q86T65 1068 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 CHSY1Q86X52 802 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 SLC15A4Q8N697 577 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 SLC35G2Q8TBE7 412 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 XAGE5Q8WWM1 108 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 SOCS4Q8WXH5 440 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 AIFM3Q96NN9 605 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 MOGAT1Q96PD6 335 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 LENG8Q96PV6 779 aaPredicted RBP4.23□□□□□ -1.73
TRAV40-201ENST00000390467 THAP7Q9BT49 309 aaPredicted RBP4.23□□□□□ -1.73
TRAV40-201ENST00000390467 CDH19Q9H159 772 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 ATP6V0A4Q9HBG4 840 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 CNNM1Q9NRU3 951 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 PIH1D1Q9NWS0 290 aaKnown RBP4.23□□□□□ -1.73
TRAV40-201ENST00000390467 GABRQQ9UN88 632 aa4.23□□□□□ -1.73
TRAV40-201ENST00000390467 PRRT4C9JH25 899 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 MYO1FO00160 1098 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 ADAMTS3O15072 1205 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 NPSP0C0P6 89 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 KITP10721 976 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 HSPA6P17066 643 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 KCNA3P22001 575 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 KELP23276 732 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 FPR3P25089 353 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 DGKEP52429 567 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 TPTEP56180 551 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 WNT3P56703 355 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 CTBP1Q13363 440 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 ETFDHQ16134 617 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 EPHA10Q5JZY3 1008 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 FCRL6Q6DN72 434 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 SWSAP1Q6NVH7 229 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 TRIM72Q6ZMU5 477 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 PARS2Q7L3T8 475 aaKnown RBP4.22□□□□□ -1.73
TRAV40-201ENST00000390467 OVCH2Q7RTZ1 564 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 GAS2L3Q86XJ1 694 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 SLC15A3Q8IY34 581 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 RAVER1Q8IY67 606 aaKnown RBP4.22□□□□□ -1.73
TRAV40-201ENST00000390467 RP9Q8TA86 221 aaKnown RBP4.22□□□□□ -1.73
TRAV40-201ENST00000390467 TMEM171Q8WVE6 324 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 OSCP1Q8WVF1 389 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 KBTBD7Q8WVZ9 684 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 MAML1Q92585 1016 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 RITA1Q96K30 269 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 DPH1Q9BZG8 443 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.22□□□□□ -1.73
TRAV40-201ENST00000390467 TBC1D30Q9Y2I9 924 aa4.22□□□□□ -1.73
TRAV40-201ENST00000390467 PPP6CO00743 305 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 LRPAP1P30533 357 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 AGFG1P52594 562 aaKnown RBP4.21□□□□□ -1.74
TRAV40-201ENST00000390467 ANAPC15P60006 121 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 KRT17Q04695 432 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 PLA1AQ53H76 456 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 SLC18B1Q6NT16 456 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 SLC2A7Q6PXP3 512 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 ABRAQ8N0Z2 381 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 PNLDC1Q8NA58 520 aaKnown RBP4.21□□□□□ -1.74
TRAV40-201ENST00000390467 RAPGEF4Q8WZA2 1011 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 CAMKK2Q96RR4 588 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 B3GNT5Q9BYG0 378 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 SEMA4CQ9C0C4 833 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 SMURF2Q9HAU4 748 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 PDGFCQ9NRA1 345 aa4.21□□□□□ -1.74
TRAV40-201ENST00000390467 BTBD3Q9Y2F9 522 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms