RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 USP39Q53GS9 565 aaKnown RBP9.64□□□□□ -0.87
TRAV20-201ENST00000390448 STPG1Q5TH74 334 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 LMBRD2Q68DH5 695 aaPredicted RBP9.64□□□□□ -0.87
TRAV20-201ENST00000390448 RNF43Q68DV7 783 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 SYT13Q7L8C5 426 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 HS2ST1Q7LGA3 356 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 GPD1LQ8N335 351 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 PDILTQ8N807 584 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 ARL14EPQ8N8R7 260 aaPredicted RBP9.64□□□□□ -0.87
TRAV20-201ENST00000390448 ZSWIM2Q8NEG5 633 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 TSTD1Q8NFU3 115 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 SPATA18Q8TC71 538 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 SH3RF2Q8TEC5 729 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 FUBP3Q96I24 572 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAV20-201ENST00000390448 MYRFLQ96LU7 910 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 SYT15Q9BQS2 421 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 LRRC27Q9C0I9 530 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 SNX25Q9H3E2 840 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 SMOC1Q9H4F8 434 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 FBRSL1Q9HCM7 1045 aaKnown RBP9.64□□□□□ -0.87
TRAV20-201ENST00000390448 OLFML3Q9NRN5 406 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 POLR3BQ9NW08 1133 aaPredicted RBP9.64□□□□□ -0.87
TRAV20-201ENST00000390448 GDAP2Q9NXN4 497 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 TRPM5Q9NZQ8 1165 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 FBXO2Q9UK22 296 aaPredicted RBP9.64□□□□□ -0.87
TRAV20-201ENST00000390448 ANGPTL2Q9UKU9 493 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 SCN1AP35498 2009 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 RALGAPA1Q6GYQ0 2036 aa9.64□□□□□ -0.87
TRAV20-201ENST00000390448 LAMA1P25391 3075 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 C2orf78A6NCI8 922 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 KIAA0391O15091 583 aaKnown RBP9.63□□□□□ -0.87
TRAV20-201ENST00000390448 NFATC1O95644 943 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 CAVIN2O95810 425 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 BDNFP23560 247 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 MAGEA11P43364 429 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 CASP5P51878 434 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 LIMK1P53667 647 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 SEC13P55735 322 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 WNT7BP56706 349 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 PSMC1P62191 440 aaKnown RBP9.63□□□□□ -0.87
TRAV20-201ENST00000390448 SOWAHAQ2M3V2 549 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 PLK5Q496M5 336 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 C2orf27AQ580R0 203 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 VSTM1Q6UX27 236 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 DENND5BQ6ZUT9 1274 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 DPH6Q7L8W6 267 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 C11orf74Q86VG3 221 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 DNAJC19Q96DA6 116 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 ZC3H10Q96K80 434 aaKnown RBP9.63□□□□□ -0.87
TRAV20-201ENST00000390448 FAM84AQ96KN4 292 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 FNBP1Q96RU3 617 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 SLC22A12Q96S37 553 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 STRA6Q9BX79 667 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 LINC00597Q9H2U6 94 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 KIAA1586Q9HCI6 787 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 INTS13Q9NVM9 706 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 INVSQ9Y283 1065 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 NUP210Q8TEM1 1887 aaPredicted RBP9.63□□□□□ -0.87
TRAV20-201ENST00000390448 CEP295Q9C0D2 2601 aa9.63□□□□□ -0.87
TRAV20-201ENST00000390448 SLC9A3R1O14745 358 aaPredicted RBP9.62□□□□□ -0.87
TRAV20-201ENST00000390448 GABRDO14764 452 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 TRIM66O15016 1216 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 DCLK1O15075 740 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 MAP3K13O43283 966 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 HCRTO43612 131 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 ATP2C2O75185 946 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 ALDH1A2O94788 518 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 DLATP10515 647 aaKnown RBP9.62□□□□□ -0.87
TRAV20-201ENST00000390448 TNNI1P19237 187 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 LMO2P25791 158 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
TRAV20-201ENST00000390448 TNNC1P63316 161 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 AMPD3Q01432 767 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
TRAV20-201ENST00000390448 ZNF77Q15935 545 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 CCDC142Q17RM4 750 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 EML3Q32P44 896 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 N4BP2L1Q5TBK1 243 aaPredicted RBP9.62□□□□□ -0.87
TRAV20-201ENST00000390448 DAB2IPQ5VWQ8 1189 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 TDRD10Q5VZ19 366 aaKnown RBP9.62□□□□□ -0.87
TRAV20-201ENST00000390448 NAIF1Q69YI7 327 aaPredicted RBP9.62□□□□□ -0.87
TRAV20-201ENST00000390448 ANO7Q6IWH7 933 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 FAM173BQ6P4H8 233 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 OSTM1Q86WC4 334 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 RDH13Q8NBN7 331 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 OR6B3Q8NGW1 331 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 MYLPFQ96A32 169 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 RXFP3Q9NSD7 469 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 EBF1Q9UH73 591 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 SIX4Q9UIU6 781 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 ARHGAP26Q9UNA1 814 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 TCHHQ07283 1943 aa9.62□□□□□ -0.87
TRAV20-201ENST00000390448 ZNF638Q14966 1978 aaKnown RBP9.61□□□□□ -0.87
TRAV20-201ENST00000390448 ATG2BQ96BY7 2078 aa9.61□□□□□ -0.87
TRAV20-201ENST00000390448 LEFTY2O00292 366 aa9.61□□□□□ -0.87
TRAV20-201ENST00000390448 KHNYNO15037 678 aaKnown RBP9.61□□□□□ -0.87
TRAV20-201ENST00000390448 PHACTR2O75167 634 aa9.61□□□□□ -0.87
TRAV20-201ENST00000390448 TADA3O75528 432 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms