RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 KLF6Q99612 283 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 MSTO1Q9BUK6 570 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 EURLQ9NYK6 297 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 PCDHB2Q9Y5E7 798 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 CCDC22O60826 627 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 ZBTB16Q05516 673 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 SLC45A4Q5BKX6 768 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 SLC7A3Q8WY07 619 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 DCLK3Q9C098 648 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 KANSL3Q9P2N6 904 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 NUB1Q9Y5A7 615 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 PCDHB4Q9Y5E5 795 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 ACO1P21399 889 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 UBA1P22314 1058 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 AMPD1P23109 780 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 TNFSF9P41273 254 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 SCNN1BP51168 640 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 CNPY1Q3B7I2 92 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 WDR72Q3MJ13 1102 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 ZBTB33Q86T24 672 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 ACTL7BQ9Y614 415 aa18.56■□□□□ 0.56
SQSTM1-202ENST00000389805 HAUS5O94927 633 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 ADRA1DP25100 572 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 CLDN10P78369 228 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 MTM1Q13496 603 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 FYB2Q5VWT5 728 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 APOBEC3FQ8IUX4 373 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 TUBGCP5Q96RT8 1024 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 TLE6Q9H808 572 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 CST3P01034 146 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 ARL2P36404 184 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 NSFP46459 744 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 P3H1Q32P28 736 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 TTC7BQ86TV6 843 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 MORC4Q8TE76 937 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 CYTH2Q99418 400 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 ZNF184Q99676 751 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 MAK16Q9BXY0 300 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 SSC5DA1L4H1 1573 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 ARID2Q68CP9 1835 aa18.55■□□□□ 0.56
SQSTM1-202ENST00000389805 C2CD2LO14523 706 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 ATG7O95352 703 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 LYNP07948 512 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 SPATA31D3P0C874 917 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 ZSCAN5DPP0CG00 497 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 SERPINB3P29508 390 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 DYNC1I2Q13409 638 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 VGLL4Q14135 290 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 LY6KQ17RY6 165 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 SPATA31D4Q6ZUB0 917 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 GLIS1Q8NBF1 620 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 ATL2Q8NHH9 583 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 PTPRN2Q92932 1015 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 ARMCX1Q9P291 453 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 LNPEPQ9UIQ6 1025 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 USTQ9Y2C2 406 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 BANF1O75531 89 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 RALAP11233 206 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 KRT4P19013 534 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 AP1B1Q10567 949 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 CUL2Q13617 745 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 ZRSR2Q15696 482 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 ENOSF1Q7L5Y1 443 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 NCAPG2Q86XI2 1143 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 TRIM50Q86XT4 487 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 SH3TC2Q8TF17 1288 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 SYNCQ9H7C4 482 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 STYXL1Q9Y6J8 313 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 POLR2AP24928 1970 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 BAG2O95816 211 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 POTEJP0CG39 1038 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 CAPSQ13938 189 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 SEPT7Q16181 437 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 ZNF394Q53GI3 561 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 TRIM74Q86UV6 250 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 TRIM73Q86UV7 250 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 NLGN2Q8NFZ4 835 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 DMAP1Q9NPF5 467 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 TAS2R1Q9NYW7 299 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 GPRC5DQ9NZD1 345 aa18.54■□□□□ 0.56
SQSTM1-202ENST00000389805 A0A0B4J269 797 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 SOWAHBA6NEL2 793 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 ZC3H11AO75152 810 aaKnown RBP eCLIP18.53■□□□□ 0.562e-14■■■■□ 19.8
SQSTM1-202ENST00000389805 NAMPTP43490 491 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 MDH1BQ5I0G3 518 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 ANKS1BQ7Z6G8 1248 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 LRRC6Q86X45 466 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.53■□□□□ 0.563e-24■■□□□ 13.5
SQSTM1-202ENST00000389805 PRPF31Q8WWY3 499 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 SLCO2A1Q92959 643 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 TTC1Q99614 292 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 TCHPQ9BT92 498 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 CYLDQ9NQC7 956 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 KLHL11Q9NVR0 708 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 hCG_2014768A0A024R1R8 64 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 STAM2O75886 525 aa18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 FARP2O94887 1054 aaPredicted RBP18.53■□□□□ 0.56
SQSTM1-202ENST00000389805 SRGAP2CP0DJJ0 459 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms