RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PDK4Q16654 411 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 RNF148Q8N7C7 305 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 CATSPER2Q96P56 530 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 MID2Q9UJV3 735 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 NFS1Q9Y697 457 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 MYH2Q9UKX2 1941 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 DGAT1O75907 488 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 RPS6P62753 249 aaKnown RBP14.85□□□□□ -0.03
RTF1-201ENST00000389629 POU5F1BQ06416 359 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 MYBPC2Q14324 1141 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 ETNPPLQ8TBG4 499 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 MASTLQ96GX5 879 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 ZNF317Q96PQ6 595 aaPredicted RBP14.85□□□□□ -0.03
RTF1-201ENST00000389629 BTBD7Q9P203 1132 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 NKX1-2Q9UD57 310 aaPredicted RBP14.85□□□□□ -0.03
RTF1-201ENST00000389629 A0A1W2PPM1 405 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 USP1O94782 785 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 IL1R1P14778 569 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 JAM2P57087 298 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 TFDP3Q5H9I0 405 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 HEATR6Q6AI08 1181 aaKnown RBP14.85□□□□□ -0.03
RTF1-201ENST00000389629 LAYNQ6UX15 382 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 MFSD7Q6UXD7 560 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 SPOCD1Q6ZMY3 1216 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 TRIM67Q6ZTA4 783 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 CRAMP1Q96RY5 1269 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 ARHGEF3Q9NR81 526 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 ARL8BQ9NVJ2 186 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 TM9SF1O15321 606 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 TBC1D12O60347 775 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 RAG1P15918 1043 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 SNRPFP62306 86 aaKnown RBP14.85□□□□□ -0.03
RTF1-201ENST00000389629 TNFAIP1Q13829 316 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 C16orf72Q14CZ0 275 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 EFTUD2Q15029 972 aaKnown RBP eCLIP14.85□□□□□ -0.035e-7■■■■■ 28.3
RTF1-201ENST00000389629 SURF1Q15526 300 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 DUOXA2Q1HG44 320 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 KLC3Q6P597 504 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 ZFPM1Q8IX07 1006 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 ZSWIM2Q8NEG5 633 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 PRPF18Q99633 342 aaKnown RBP14.85□□□□□ -0.03
RTF1-201ENST00000389629 BCAS3Q9H6U6 928 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 GRHL1Q9NZI5 618 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 PACSIN3Q9UKS6 424 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 NUB1Q9Y5A7 615 aa14.85□□□□□ -0.03
RTF1-201ENST00000389629 STRNO43815 780 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 GRAP2O75791 330 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 GPC3P51654 580 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 USP4Q13107 963 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 MTMR2Q13614 643 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 MARK2Q7KZI7 788 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 ACTL9Q8TC94 416 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 PCDHB18PQ96TA0 734 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 DCUN1D5Q9BTE7 237 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 KRT82Q9NSB4 513 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 E9PBE3 544 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 TPST1O60507 370 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 KLHL41O60662 606 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 EDF1O60869 148 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 GCLCP48506 637 aaPredicted RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 FMO1Q01740 532 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 WDR72Q3MJ13 1102 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 HABP4Q5JVS0 413 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 RIPOR1Q6ZS17 1223 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 EFCAB3Q8N7B9 438 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 TARS2Q9BW92 718 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 SOX13Q9UN79 622 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 PABPN1LA6NDY0 278 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 C2orf71A6NGG8 1288 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 TPBGLP0DKB5 382 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 ITKQ08881 620 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 MAPK6Q16659 721 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 BMT2Q1RMZ1 405 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 ZDHHC24Q6UX98 284 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 PDZD4Q76G19 769 aaPredicted RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 ZCCHC9Q8N567 271 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 C12orf65Q9H3J6 166 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 AS3MTQ9HBK9 375 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 ZDHHC18Q9NUE0 388 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 GALNT8Q9NY28 637 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 KLHL8Q9P2G9 620 aaPredicted RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 GRID1Q9ULK0 1009 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 USP20Q9Y2K6 914 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 STXBP5LQ9Y2K9 1186 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 ARFGEF2Q9Y6D5 1785 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 CYP3A7-CYP3A51PA0A087WV96 503 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 WFS1O76024 890 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 GYS1P13807 737 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 CYP3A7P24462 503 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 HDAC4P56524 1084 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 RPL10AP62906 217 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 SLC25A3Q00325 362 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 ZNF568Q3ZCX4 644 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 MFSD5Q6N075 450 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 NCAPG2Q86XI2 1143 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 CYGBQ8WWM9 190 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 FAXDC2Q96IV6 333 aa14.84□□□□□ -0.03
RTF1-201ENST00000389629 DHX35Q9H5Z1 703 aaKnown RBP14.84□□□□□ -0.03
RTF1-201ENST00000389629 EXTL3O43909 919 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms