RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 MRPS18AQ9NVS2 196 aaKnown RBP3.38□□□□□ -1.87
RNU6-48P-201ENST00000384161 STK32BQ9NY57 414 aa3.38□□□□□ -1.87
RNU6-48P-201ENST00000384161 COL20A1Q9P218 1284 aa3.38□□□□□ -1.87
RNU6-48P-201ENST00000384161 LRIT1Q9P2V4 623 aa3.38□□□□□ -1.87
RNU6-48P-201ENST00000384161 SH2B3Q9UQQ2 575 aa3.38□□□□□ -1.87
RNU6-48P-201ENST00000384161 FAM50BQ9Y247 325 aa3.38□□□□□ -1.87
RNU6-48P-201ENST00000384161 PMM2O15305 246 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 SLC16A3O15427 465 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 THAP12O43422 761 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 RASSF9O75901 435 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 NXPH3O95157 252 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ANXA2P07355 339 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 PARP1P09874 1014 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 SLC5A1P13866 664 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 MPLP40238 635 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 PIK3CBP42338 1070 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 DGKEP52429 567 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZNF134P52741 427 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 AK2P54819 239 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 RPS16P62249 146 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 MRPS35P82673 323 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 MYO1EQ12965 1108 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ARHGEF7Q14155 803 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 SLC29A2Q14542 456 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 C3orf38Q5JPI3 329 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 PLAC9Q5JTB6 97 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ARHGAP40Q5TG30 622 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 DCAF12L1Q5VU92 463 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 KAZNQ674X7 775 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ATP11CQ8NB49 1132 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 LPIN2Q92539 896 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 TNIP3Q96KP6 325 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 SNX22Q96L94 193 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 TTPALQ9BTX7 342 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 STK31Q9BXU1 1019 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 EIF2AQ9BY44 585 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZCWPW1Q9H0M4 648 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 STARD7Q9NQZ5 370 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 TRMT13Q9NUP7 481 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 EHD3Q9NZN3 535 aa3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 NDRG4Q9ULP0 352 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 EPN1Q9Y6I3 576 aaPredicted RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 POLR2AP24928 1970 aaKnown RBP3.37□□□□□ -1.87
RNU6-48P-201ENST00000384161 CCDC194A0A1B0GVG4 234 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 AQP7P3A6NL99 342 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 AREL1O15033 823 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 MT-ND5P03915 603 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 TXNP10599 105 aaKnown RBP3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 PRKAR1BP31321 381 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 TM4SF4P48230 202 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 ALDH9A1P49189 494 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 CARSP49589 748 aaKnown RBP3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 PDE6CP51160 858 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 CASP5P51878 434 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 BTKQ06187 659 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZNF543Q08ER8 600 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 BMPR2Q13873 1038 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 MAP9Q49MG5 647 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 COLEC12Q5KU26 742 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZNF618Q5T7W0 954 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 RGS7BPQ6MZT1 257 aaPredicted RBP3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 MZT2AQ6P582 158 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 RNF44Q7L0R7 432 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 BEND5Q7L4P6 421 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 BHLHA9Q7RTU4 235 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 SLC15A3Q8IY34 581 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 SPARTQ8N0X7 666 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 SLC44A3Q8N4M1 653 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 BEND2Q8NDZ0 799 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 OR56A3Q8NH54 315 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 SVIPQ8NHG7 77 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 MYCBPAPQ8TBZ2 947 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 CAGE1Q8TC20 777 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 BRI3BPQ8WY22 251 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 RAPGEF4Q8WZA2 1011 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 PPP2R3CQ969Q6 453 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 FKBP10Q96AY3 582 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 IQCDQ96DY2 449 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZNF668Q96K58 619 aaPredicted RBP3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 PBKQ96KB5 322 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 TBCBQ99426 244 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 MYD88Q99836 296 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 APOL5Q9BWW9 433 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 NAA15Q9BXJ9 866 aaKnown RBP3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 CHST8Q9H2A9 424 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 ZNF212Q9UDV6 495 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 ITGB1BP2Q9UKP3 347 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 HDAC9Q9UKV0 1011 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 CAPN11Q9UMQ6 739 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 SSX2IPQ9Y2D8 614 aa3.36□□□□□ -1.87
RNU6-48P-201ENST00000384161 WDR27A2RRH5 827 aa3.35□□□□□ -1.87
RNU6-48P-201ENST00000384161 POM121BA6NF01 834 aa3.35□□□□□ -1.87
RNU6-48P-201ENST00000384161 CLCA1A8K7I4 914 aa3.35□□□□□ -1.87
RNU6-48P-201ENST00000384161 TMEM233B4DJY2 109 aa3.35□□□□□ -1.87
RNU6-48P-201ENST00000384161 GCOM1H8Y6P7 765 aaPredicted RBP3.35□□□□□ -1.87
RNU6-48P-201ENST00000384161 INO80B-WBP1J3KQ70 363 aa3.35□□□□□ -1.87
RNU6-48P-201ENST00000384161 PRKCBP05771 671 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms