RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 K7ESF4 209 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 DDX6P26196 483 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHOX-202ENST00000381575 USP46P62068 366 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 RUNX3Q13761 415 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 PPP2R5DQ14738 602 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 SURF1Q15526 300 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 MDH1BQ5I0G3 518 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 FAM171BQ6P995 826 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 LIMS2Q7Z4I7 341 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 ZNF516Q92618 1163 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 FNBP1Q96RU3 617 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 IER2Q9BTL4 223 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 FAM126AQ9BYI3 521 aaPredicted RBP15.14■□□□□ 0.01
SHOX-202ENST00000381575 DPEP3Q9H4B8 488 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 FAM13BQ9NYF5 915 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 UXTQ9UBK9 157 aaPredicted RBP15.14■□□□□ 0.01
SHOX-202ENST00000381575 SERTAD1Q9UHV2 236 aa15.14■□□□□ 0.01
SHOX-202ENST00000381575 CLSTN1O94985 981 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 UBE4BO95155 1302 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 CKMP06732 381 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 WARSP23381 471 aaKnown RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 PXNP49023 591 aaPredicted RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 NRLP54845 237 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 PSMD6Q15008 389 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 RSPO4Q2I0M5 234 aaPredicted RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 DGKKQ5KSL6 1271 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 FSTL4Q6MZW2 842 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 ARL14EPQ8N8R7 260 aaPredicted RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 XXYLT1Q8NBI6 393 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 SPATA18Q8TC71 538 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 PLEKHO2Q8TD55 490 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 TRMT2BQ96GJ1 504 aaKnown RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 MAGEF1Q9HAY2 307 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 KIAA1586Q9HCI6 787 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 FBRSL1Q9HCM7 1045 aaKnown RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 PARD6AQ9NPB6 346 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 MAGEC2Q9UBF1 373 aaPredicted RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 CDH9Q9ULB4 789 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 USP18Q9UMW8 372 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 WNT6Q9Y6F9 365 aa15.13■□□□□ 0.01
SHOX-202ENST00000381575 MYO18AQ92614 2054 aaKnown RBP15.13■□□□□ 0.01
SHOX-202ENST00000381575 TRAV19A0A0A6YYK7 116 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 HRO43593 1189 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 EGFP01133 1207 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 GRIK1P39086 918 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 MAGEA11P43364 429 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 CACNA2D1P54289 1103 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 MYL6P60660 151 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 MTF1Q14872 753 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 ZNF77Q15935 545 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 WDR72Q3MJ13 1102 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 CC2D1AQ6P1N0 951 aaPredicted RBP15.12■□□□□ 0.01
SHOX-202ENST00000381575 C1orf228Q6PIY5 440 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 SCARA5Q6ZMJ2 495 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 MAMSTRQ6ZN01 415 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 C4orf50Q6ZRC1 276 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 DPH6Q7L8W6 267 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 OR6B3Q8NGW1 331 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 PCED1BQ96HM7 432 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 FUBP3Q96I24 572 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHOX-202ENST00000381575 MYRFLQ96LU7 910 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 SNX25Q9H3E2 840 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 KIF9Q9HAQ2 790 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 TMEM30AQ9NV96 361 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
SHOX-202ENST00000381575 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
SHOX-202ENST00000381575 MED19A0JLT2 244 aaPredicted RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 CLDN5O00501 218 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 SCAMP3O14828 347 aaKnown RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 ACTN4O43707 911 aaKnown RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 KLRC4O43908 158 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 EXOC3O60645 756 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 USP17L7P0C7H9 530 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 GNL1P36915 607 aaPredicted RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 RAP1GAPP47736 663 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 TNNC1P63316 161 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 FAM160A1Q05DH4 1040 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 SPEM2Q0P670 501 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 IFRD2Q12894 506 aaPredicted RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 USP4Q13107 963 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 KNOP1Q1ED39 458 aaKnown RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 BMT2Q1RMZ1 405 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 ERMP1Q7Z2K6 904 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 DGLUCYQ7Z3D6 616 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 CEP57L1Q8IYX8 460 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 KIAA0895Q8NCT3 520 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 MYCBPAPQ8TBZ2 947 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 SH3RF2Q8TEC5 729 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 SMYD3Q9H7B4 428 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 GCNT4Q9P109 453 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 GMEB2Q9UKD1 530 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 RAB23Q9ULC3 237 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 A0A1B0GVL5 298 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 F8VP50 259 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 TGM1P22735 817 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 ANXA13P27216 316 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 STK4Q13043 487 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 BIRC3Q13489 604 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms