RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MAN1A1P33908 653 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 HIRAP54198 1017 aaPredicted RBP14.51□□□□□ -0.09
SDC1-202ENST00000381150 TAS2R40P59535 323 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 AP2B1P63010 937 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 TMPRSS15P98073 1019 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 OCRLQ01968 901 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 ASPHQ12797 758 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 STX18Q9P2W9 335 aaKnown RBP14.51□□□□□ -0.09
SDC1-202ENST00000381150 LGALS13Q9UHV8 139 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 PPM1HQ9ULR3 514 aa14.51□□□□□ -0.09
SDC1-202ENST00000381150 SORBS3O60504 671 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 RNASEH1O60930 286 aaKnown RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 TRPA1O75762 1119 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 STBD1O95210 358 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 TPP2P29144 1249 aaPredicted RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 ADSSP30520 456 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 BASP1P80723 227 aaKnown RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 PRPF39Q86UA1 669 aaKnown RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 SCUBE1Q8IWY4 988 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 BBOF1Q8ND07 529 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 GSTCDQ8NEC7 633 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 PSPC1Q8WXF1 523 aaKnown RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 ACAP3Q96P50 834 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 HSPBP1Q9NZL4 362 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 ZNF112Q9UJU3 913 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 PHIPQ8WWQ0 1821 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 PMM2O15305 246 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 KRT1P04264 644 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 HNRNPCP07910 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
SDC1-202ENST00000381150 HARSP12081 509 aaKnown RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 RPS12P25398 132 aaKnown RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 YWHAGP61981 247 aaKnown RBP eCLIP14.5□□□□□ -0.09
SDC1-202ENST00000381150 PSMC5P62195 406 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 MED21Q13503 144 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 ANO5Q75V66 913 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 VSIG10LQ86VR7 867 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 RBM15BQ8NDT2 890 aaKnown RBP14.5□□□□□ -0.09
SDC1-202ENST00000381150 SHKBP1Q8TBC3 707 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 TAS1R2Q8TE23 839 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 SEMA4DQ92854 862 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 ATG4CQ96DT6 458 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 BICD1Q96G01 975 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 PAFAH2Q99487 392 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 UVRAGQ9P2Y5 699 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 HACL1Q9UJ83 578 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 ADAMTS5Q9UNA0 930 aa14.5□□□□□ -0.09
SDC1-202ENST00000381150 P4HA2O15460 535 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 MYCLP12524 364 aaPredicted RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 PEX3P56589 373 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 TRIP10Q15642 601 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 MMEL1Q495T6 779 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 RAPH1Q70E73 1250 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 ZNF513Q8N8E2 541 aaPredicted RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 KLHL23Q8NBE8 558 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 XXYLT1Q8NBI6 393 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 NT5C1BQ96P26 610 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 ECSITQ9BQ95 431 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 TIPINQ9BVW5 301 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 TCEAL9Q9UHQ7 104 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 AGTPBP1Q9UPW5 1226 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 LOC100653049A0A140TA62 436 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 KRT34O76011 436 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 RGS20O76081 388 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 RFX1P22670 979 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 DALRD3Q5D0E6 543 aaKnown RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 DENND1AQ8TEH3 1009 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 POMGNT1Q8WZA1 660 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 GATA6Q92908 595 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 SAR1AQ9NR31 198 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 ANKEF1Q9NU02 776 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 SIGLEC16A6NMB1 481 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 GCAP28676 217 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 NRLP54845 237 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 BACE1P56817 501 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 SNRPFP62306 86 aaKnown RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 BAATQ14032 418 aaPredicted RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 DBN1Q16643 649 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 HIF1AQ16665 826 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 RABGAP1LQ5R372 815 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 PLA2G4FQ68DD2 849 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 TMEM161BQ8NDZ6 487 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 PRPF31Q8WWY3 499 aaKnown RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 OXNAD1Q96HP4 312 aaPredicted RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 SENP7Q9BQF6 1050 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 DNAAF2Q9NVR5 837 aaKnown RBP14.49□□□□□ -0.09
SDC1-202ENST00000381150 RAB20Q9NX57 234 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 KANSL3Q9P2N6 904 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 TELO2Q9Y4R8 837 aa14.49□□□□□ -0.09
SDC1-202ENST00000381150 SPECC1L-ADORA2AF8WAN1 911 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 I3L4J1 428 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 TLR3O15455 904 aaKnown RBP14.48□□□□□ -0.09
SDC1-202ENST00000381150 ADRB2P07550 413 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 TCF4P15884 667 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 JAK3P52333 1124 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 SLC25A3Q00325 362 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 SMTNL2Q2TAL5 461 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ACAD10Q6JQN1 1059 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ANKS1BQ7Z6G8 1248 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 MICALL2Q8IY33 904 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms