RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 KAT5Q92993 513 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 MCRS1Q96EZ8 462 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 HEXIM2Q96MH2 286 aaKnown RBP20.6■□□□□ 0.89
GTF3A-201ENST00000381140 NDST4Q9H3R1 872 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.6■□□□□ 0.89
GTF3A-201ENST00000381140 SLC38A8A6NNN8 435 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 F8VP50 259 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 DLL1O00548 723 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 NRG2O14511 850 aaPredicted RBP20.59■□□□□ 0.89
GTF3A-201ENST00000381140 ZNF197O14709 1029 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 SLC9A1P19634 815 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 CACNA2D1P54289 1103 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 MIIPQ5JXC2 388 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 PRSS36Q5K4E3 855 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 VSTM1Q6UX27 236 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 TMC8Q8IU68 726 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 DHX40Q8IX18 779 aaKnown RBP20.59■□□□□ 0.89
GTF3A-201ENST00000381140 NPAS3Q8IXF0 933 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 PLCD3Q8N3E9 789 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 LEMD2Q8NC56 503 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 VPS16Q9H269 839 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 KRT82Q9NSB4 513 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 CDH7Q9ULB5 785 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 MYO16Q9Y6X6 1858 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 ANAPC1Q9H1A4 1944 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 A0A1W2PRU2 124 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 TNFRSF10AO00220 468 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 TRIM66O15016 1216 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 ASGR2P07307 311 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 TPM2P07951 284 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 CDK11BP21127 795 aaKnown RBP20.59■□□□□ 0.89
GTF3A-201ENST00000381140 GABRR2P28476 465 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 APBA1Q02410 837 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 KRT31Q15323 416 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 EXOC3L4Q17RC7 722 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 TRIM65Q6PJ69 517 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 LUZP1Q86V48 1076 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 ZDHHC14Q8IZN3 488 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 FUKQ8N0W3 1084 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 LRRC3Q9BY71 257 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 SLITRK6Q9H5Y7 841 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 UBE2TQ9NPD8 197 aaPredicted RBP20.59■□□□□ 0.89
GTF3A-201ENST00000381140 AVENQ9NQS1 362 aaPredicted RBP20.59■□□□□ 0.89
GTF3A-201ENST00000381140 PCDHB4Q9Y5E5 795 aa20.59■□□□□ 0.89
GTF3A-201ENST00000381140 PATJQ8NI35 1801 aa20.58■□□□□ 0.89
GTF3A-201ENST00000381140 AP1G2O75843 785 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 CSH1P0DML2 217 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 CSH2P0DML3 217 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 LAMP2P13473 410 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 RAD23BP54727 409 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 EPHA5P54756 1037 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 IFRD2Q12894 506 aaPredicted RBP20.58■□□□□ 0.88
GTF3A-201ENST00000381140 NCAPHQ15003 741 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 TEAD2Q15562 447 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 PHLDB3Q6NSJ2 640 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 GJB7Q6PEY0 223 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 TMEM270Q6UE05 265 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 PAQR9Q6ZVX9 377 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 SLC4A11Q8NBS3 891 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 ANKRD20A12PQ8NF67 263 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 SHKBP1Q8TBC3 707 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 CYFIP2Q96F07 1278 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 SMARCD1Q96GM5 515 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 TMEM176AQ96HP8 235 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 GCNAQ96QF7 691 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 ATXN3LQ9H3M9 355 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 TMEM30AQ9NV96 361 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 MUTYHQ9UIF7 546 aa20.58■□□□□ 0.88
GTF3A-201ENST00000381140 VCANP13611 3396 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 SMTNL1A8MU46 457 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 BECN2A8MW95 431 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 CD19P15391 556 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 HMGA1P17096 107 aaKnown RBP20.57■□□□□ 0.88
GTF3A-201ENST00000381140 GAREM2Q75VX8 874 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 KHSRPQ92945 711 aaKnown RBP eCLIP20.57■□□□□ 0.889e-6■□□□□ 10.6
GTF3A-201ENST00000381140 JAKMIP2Q96AA8 810 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 KCNK16Q96T55 309 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 EPS15L1Q9UBC2 864 aa20.57■□□□□ 0.88
GTF3A-201ENST00000381140 GTPBP10A4D1E9 387 aaKnown RBP20.56■□□□□ 0.88
GTF3A-201ENST00000381140 MOSPD3O75425 235 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 KRT5P13647 590 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 PON1P27169 355 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 MAP3K7CLP57077 242 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 CYP4F8P98187 520 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 GCNT1Q02742 428 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 PPP1R26Q5T8A7 1209 aaPredicted RBP20.56■□□□□ 0.88
GTF3A-201ENST00000381140 UBR7Q8N806 425 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 RSAD2Q8WXG1 361 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 C8orf48Q96LL4 319 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 KREMEN1Q96MU8 473 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 IL21Q9HBE4 155 aa20.56■□□□□ 0.88
GTF3A-201ENST00000381140 DMAP1Q9NPF5 467 aaPredicted RBP20.56■□□□□ 0.88
GTF3A-201ENST00000381140 NUP210Q8TEM1 1887 aaPredicted RBP20.55■□□□□ 0.88
GTF3A-201ENST00000381140 GOLGA6L19H0YKK7 550 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 NOL4O94818 638 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 FGF19O95750 216 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 FAM200BP0CF97 657 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 CDC25CP30307 473 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 ARHGAP44Q17R89 818 aa20.55■□□□□ 0.88
GTF3A-201ENST00000381140 ARHGAP15Q53QZ3 475 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms