RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ZWILCHQ9H900 591 aa17.07■□□□□ 0.32
NKX3-1-201ENST00000380871 RNPEPL1Q9HAU8 725 aa17.07■□□□□ 0.32
NKX3-1-201ENST00000380871 ALOX15BO15296 676 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 STAM2O75886 525 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 GNAZP19086 355 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 NLRP9Q7RTR0 991 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 TDRPQ86YL5 185 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 RBM41Q96IZ5 413 aaKnown RBP17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 DENND2DQ9H6A0 471 aaPredicted RBP17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 PIK3R2O00459 728 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 CDKN2BP42772 138 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 CTCFP49711 727 aaPredicted RBP17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 CDH8P55286 799 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 MORF4L2Q15014 288 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 HIF1AQ16665 826 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 MIPEPQ99797 713 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 PSMC3IPQ9P2W1 217 aaPredicted RBP17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 RABGEF1Q9UJ41 708 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 SMG5Q9UPR3 1016 aaKnown RBP17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 RTP1P59025 263 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 DNAJC24Q6P3W2 148 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 CENPUQ71F23 418 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 TTC25Q96NG3 672 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 MMP19Q99542 508 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 CGRRF1Q99675 332 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 POLIQ9UNA4 740 aa17.06■□□□□ 0.32
NKX3-1-201ENST00000380871 PHIPQ8WWQ0 1821 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 LTBP3Q9NS15 1303 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 CD48P09326 243 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 TPBGLP0DKB5 382 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 LMNB2Q03252 620 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 NR1H3Q13133 447 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 PARP6Q2NL67 630 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 TFDP3Q5H9I0 405 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 METTL7BQ6UX53 244 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 ZBTB8OSQ8IWT0 167 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 TCP10LQ8TDR4 215 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 CYLDQ9NQC7 956 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 ZFP69BQ9UJL9 534 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 ARID2Q68CP9 1835 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 SMNDC1O75940 238 aaKnown RBP eCLIP17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 ATG7O95352 703 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 ICAM3P32942 547 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 PEX19P40855 299 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 CCNHP51946 323 aaPredicted RBP17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 TRIM72Q6ZMU5 477 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 RGS9BPQ6ZS82 235 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 NAF1Q96HR8 494 aaKnown RBP17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 RBPJLQ9UBG7 517 aa17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.05■□□□□ 0.32
NKX3-1-201ENST00000380871 A0A0G2JND7 137 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 DCTN3O75935 186 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 LDHAP00338 332 aaKnown RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 CALB2P22676 271 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 CETN2P41208 172 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 SESN3P58005 492 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 OTUD4Q01804 1114 aaKnown RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 SH3D19Q5HYK7 790 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 EFCAB12Q6NXP0 572 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 C3orf62Q6ZUJ4 267 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 AGGF1Q8N302 714 aaeCLIP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 WDTC1Q8N5D0 677 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 ACTL9Q8TC94 416 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 TFAP2BQ92481 460 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 CPT1BQ92523 772 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 OPTNQ96CV9 577 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 VCPIP1Q96JH7 1222 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 PAFAH2Q99487 392 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 TCRBV5S1A1TA0A578 114 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 IL1R2P27930 398 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 ALDH3A1P30838 453 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 GEMIN4P57678 1058 aaKnown RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 NOL9Q5SY16 702 aaKnown RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 GPAT2Q6NUI2 795 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 CLNKQ7Z7G1 428 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 ZNF276Q8N554 614 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 STK32AQ8WU08 396 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 FBXO6Q9NRD1 293 aaPredicted RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 ADARB2Q9NS39 739 aaKnown RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 CNTNAP2Q9UHC6 1331 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 TMEM63AO94886 807 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 PDHA1P08559 390 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 LRRC6Q86X45 466 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 FBXO36Q8NEA4 188 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 PYROXD1Q8WU10 500 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 FOXP3Q9BZS1 431 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 RNPEPQ9H4A4 650 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 FARP1Q9Y4F1 1045 aaPredicted RBP17.04■□□□□ 0.32
NKX3-1-201ENST00000380871 MAFO75444 373 aaPredicted RBP17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 WFS1O76024 890 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms