RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 FBXO40Q9UH90 709 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 APOL1O14791 398 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 NR3C2P08235 984 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 IFRD2Q12894 506 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 C15orf52Q6ZUT6 534 aaKnown RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 FOXP3Q9BZS1 431 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 DCLRE1BQ9H816 532 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 ADAMTSL3P82987 1691 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 PFDN1O60925 122 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 RBP3P10745 1247 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 MUTP22033 750 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 GTF2A2P52657 109 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 SATB1Q01826 763 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 ISLR2Q6UXK2 745 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 FAM149B1Q96BN6 582 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 CDHR1Q96JP9 859 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 SLC38A10Q9HBR0 1119 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 TMX2Q9Y320 296 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 LIASO43766 372 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 KRT36O76013 467 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 MAP3K21Q5TCX8 1036 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 SLITRK1Q96PX8 696 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 AQP5P55064 265 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 VCPP55072 806 aaKnown RBP11.88□□□□□ -0.51
SMAD9-202ENST00000379826 DSG1Q02413 1049 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 TAP1Q03518 808 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 STX3Q13277 289 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 PGM5Q15124 567 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 MMEL1Q495T6 779 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 IZUMO2Q6UXV1 221 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 RNF149Q8NC42 400 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 LRGUKQ96M69 825 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 LOC100653049A0A140TA62 436 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 KRT34O76011 436 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 SNX16P57768 344 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 AP1B1Q10567 949 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 TMED1Q13445 227 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 MYBPC2Q14324 1141 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 DUOXA2Q1HG44 320 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 WASHC2DQ5SRD0 308 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 MFSD5Q6N075 450 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 MTBPQ96DY7 904 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 NEMP1O14524 444 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 ABCD1P33897 745 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 SESN2P58004 480 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-202ENST00000379826 MAPK6Q16659 721 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 ALKBH8Q96BT7 664 aaKnown RBP11.88□□□□□ -0.51
SMAD9-202ENST00000379826 MRPL4Q9BYD3 311 aaKnown RBP11.88□□□□□ -0.51
SMAD9-202ENST00000379826 GPR88Q9GZN0 384 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 DHX35Q9H5Z1 703 aaKnown RBP11.88□□□□□ -0.51
SMAD9-202ENST00000379826 ANKEF1Q9NU02 776 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 COMMD10Q9Y6G5 202 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 FAM237BA0A1B0GVD1 139 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 AP1G2O75843 785 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 CYP2B6P20813 491 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 PEX5P50542 639 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 RPL7AP62424 266 aaKnown RBP11.88□□□□□ -0.51
SMAD9-202ENST00000379826 STXBP2Q15833 593 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 LRRC71Q8N4P6 559 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 SHC3Q92529 594 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 LENG9Q96B70 501 aa11.88□□□□□ -0.51
SMAD9-202ENST00000379826 ELK3P41970 407 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 CACNA2D1P54289 1103 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 SLC1A5Q15758 541 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 OTOAQ7RTW8 1153 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 SCUBE1Q8IWY4 988 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 ACTL9Q8TC94 416 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 OXNAD1Q96HP4 312 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 SLC17A7Q9P2U7 560 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 IGLV3-22A0A075B6J6 115 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 FOXN2P32314 431 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 PAPOLAP51003 745 aaKnown RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 FAAP100Q0VG06 881 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 TFDP2Q14188 446 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 LRRC74BQ6ZQY2 392 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 ZCCHC23Q6ZST2 131 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 KATNAL2Q8IYT4 538 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 NDUFAF2Q8N183 169 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 DCLK2Q8N568 766 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 NLRP7Q8WX94 980 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 NOCTQ9UK39 431 aaKnown RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 INPP5FQ9Y2H2 1132 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 MYL6P60660 151 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 GTF2BQ00403 316 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 PRAMEF18Q5VWM3 479 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 NPNTQ6UXI9 565 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 NKX1-2Q9UD57 310 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 SLC24A2Q9UI40 661 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms