RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 MAD1L1Q9Y6D9 718 aa6.86□□□□□ -1.31
NEDD9-202ENST00000379446 SLC38A8A6NNN8 435 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 INPPL1O15357 1258 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 B4GALT4O60513 344 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TOM1L1O75674 476 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TUBBP07437 444 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 PLEKP08567 350 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 ZBED6P86452 979 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 MAP3K10Q02779 954 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CALCOCO2Q13137 446 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TPRG1Q6ZUI0 275 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 ACOT1Q86TX2 421 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 KCTD6Q8NC69 237 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CFAP61Q8NHU2 1237 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 EPAS1Q99814 870 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 MTA3Q9BTC8 594 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CUEDC2Q9H467 287 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 DHX35Q9H5Z1 703 aaKnown RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 ZWILCHQ9H900 591 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 NDFIP2Q9NV92 336 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 DUS2Q9NX74 493 aaKnown RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 GCNT4Q9P109 453 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 MORF4L1Q9UBU8 362 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TMEM150BA6NC51 233 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 GRAP2O75791 330 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 BAIAP3O94812 1187 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 FTCDO95954 541 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 AFPP02771 609 aaKnown RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 PLS3P13797 630 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 PSMA2P25787 234 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 AP3M2P53677 418 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 SEC24CP53992 1094 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CDH8P55286 799 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 MAP3K7CLP57077 242 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 ZBTB41Q5SVQ8 909 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 SDHAF4Q5VUM1 108 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 DOK6Q6PKX4 331 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CD302Q8IX05 232 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CTAGE3PQ8IX95 158 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CCHCR1Q8TD31 782 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 SPDL1Q96EA4 605 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 ZNF333Q96JL9 665 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 SENP8Q96LD8 212 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 KXD1Q9BQD3 176 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 LACRTQ9GZZ8 138 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 THAP9Q9H5L6 903 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 PLK2Q9NYY3 685 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 KLHL8Q9P2G9 620 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 SEL1LQ9UBV2 794 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 KLHL3Q9UH77 587 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 PCSK1NQ9UHG2 260 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 STK38LQ9Y2H1 464 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 BDP1A6H8Y1 2624 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CRYBG1Q9Y4K1 1723 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 KANSL1LA0AUZ9 987 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TBC1D4O60343 1298 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 RHOCP08134 193 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 VIMP08670 466 aaKnown RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 BDNFP23560 247 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 HTR1BP28222 390 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 NAMPTP43490 491 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 SULT1E1P49888 294 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 GUCY1A3Q02108 690 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CENPCQ03188 943 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TUSC3Q13454 348 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 IL17AQ16552 155 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 DENND5BQ6ZUT9 1274 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 MFN1Q8IWA4 741 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 ZSCAN1Q8NBB4 408 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 ADAMTS19Q8TE59 1207 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 SHISA4Q96DD7 197 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 DHTKD1Q96HY7 919 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 PTPN18Q99952 460 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 FAM167BQ9BTA0 163 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TSGA10Q9BZW7 698 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 KRT82Q9NSB4 513 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 TMEM161AQ9NX61 479 aa6.85□□□□□ -1.31
NEDD9-202ENST00000379446 CHD2O14647 1828 aaKnown RBP6.85□□□□□ -1.31
NEDD9-202ENST00000379446 LRRD1A4D1F6 860 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 RNASEH2AO75792 299 aaKnown RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 USP17L7P0C7H9 530 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TRIM49P0CI25 452 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TRIM49CP0CI26 452 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 VCLP18206 1134 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 IRAK1P51617 712 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 VAV2P52735 878 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 PTPN11Q06124 597 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 GRIK3Q13003 919 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ORC1Q13415 861 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 PUS10Q3MIT2 529 aaKnown RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 HECTD3Q5T447 861 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 CYP2U1Q7Z449 544 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 CCDC60Q8IWA6 550 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ELOA2Q8IYF1 753 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TRIM58Q8NG06 486 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 SOHLH2Q9NX45 425 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 HACD3Q9P035 362 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ADAM28Q9UKQ2 775 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms