RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 NDUFA5Q16718 116 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 OGFOD2Q6N063 350 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 TMC7Q7Z402 723 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 RHOT1Q8IXI2 618 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 EXOC8Q8IYI6 725 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 CENPSQ8N2Z9 138 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 PAF1Q8N7H5 531 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 FBXL8Q96CD0 374 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
USP6NL-202ENST00000379237 TLE6Q9H808 572 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 PSTPIP2Q9H939 334 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 MOSPD1Q9UJG1 213 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 HEMK1Q9Y5R4 338 aaPredicted RBP11.4□□□□□ -0.58
USP6NL-202ENST00000379237 SNX13Q9Y5W8 968 aa11.4□□□□□ -0.58
USP6NL-202ENST00000379237 TUBGCP6Q96RT7 1819 aa11.4□□□□□ -0.59
USP6NL-202ENST00000379237 FUOMA2VDF0 154 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 MUTP22033 750 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 VARSP26640 1264 aaKnown RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 MSX2P35548 267 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 CASP5P51878 434 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 TBC1D10BQ4KMP7 808 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 TBC1D9BQ66K14 1250 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 CYGBQ8WWM9 190 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 NSMCE3Q96MG7 304 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 PCDH12Q9NPG4 1184 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 MYH7P12883 1935 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 E9PBE3 544 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 MAGEB2O15479 319 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 DEAF1O75398 565 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 BANF1O75531 89 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 CRTAMO95727 393 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 HSPA4LO95757 839 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 WEE2P0C1S8 567 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 PPATQ06203 517 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 NEDD8Q15843 81 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 BSPRYQ5W0U4 402 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 XKR5Q6UX68 686 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 USP37Q86T82 979 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 BBS5Q8N3I7 341 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 ZCCHC9Q8N567 271 aaKnown RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 USP13Q92995 863 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 DNAJC16Q9Y2G8 782 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 A2ML1A8K2U0 1454 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 CHEK2O96017 543 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 FGFR3P22607 806 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 BST1Q10588 318 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 CARTPTQ16568 116 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 ZNF423Q2M1K9 1284 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 NDUFAF2Q8N183 169 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 FBXO36Q8NEA4 188 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 SLC35C1Q96A29 364 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 TAMM41Q96BW9 452 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 PTCD3Q96EY7 689 aaKnown RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 FGFBP2Q9BYJ0 223 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 GCOM2Q9BZD3 368 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 C20orf96Q9NUD7 363 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 K7EPI3 171 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 NEMP1O14524 444 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 SIN3BO75182 1162 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 GRM4Q14833 912 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 ANO4Q32M45 955 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 C14orf80Q86SX3 495 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 CCDC33Q8N5R6 958 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 EYA3Q99504 573 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 HNRNPABQ99729 332 aaKnown RBP11.39□□□□□ -0.59
USP6NL-202ENST00000379237 C11orf70Q9BRQ4 267 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 ARAP3Q8WWN8 1544 aa11.39□□□□□ -0.59
USP6NL-202ENST00000379237 PSMD12O00232 456 aaPredicted RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 KRT3P12035 628 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 NMT1P30419 496 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 IREB2P48200 963 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 FASTKD3Q14CZ7 662 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ARSHQ5FYA8 562 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SPDYAQ5MJ70 313 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PAOXQ6QHF9 649 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PCGF5Q86SE9 256 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 MAPKAPK5Q8IW41 473 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ETNPPLQ8TBG4 499 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SUN5Q8TC36 379 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PLEKHA8Q96JA3 519 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SNX27Q96L92 541 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 NT5C1BQ96P26 610 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 REEP2Q9BRK0 252 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 MECRQ9BV79 373 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UPF3AQ9H1J1 476 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ACP6Q9NPH0 428 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 WDR64B1ANS9 1081 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 K7ENM7 598 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PFDN6O15212 129 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 AKAP10O43572 662 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PICALMQ13492 652 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms